Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS18290
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 3,551,478 | + | SGL_RS18285 | 0.26 | +0.2 | |
| 3,551,478 | + | SGL_RS18285 | 0.26 | +0.3 | |
| 3,551,604 | - | SGL_RS18285 | 0.36 | -0.2 | |
| 3,551,700 | + | SGL_RS18285 | 0.44 | +0.8 | |
| 3,551,738 | + | SGL_RS18285 | 0.47 | -0.1 | |
| 3,551,741 | - | SGL_RS18285 | 0.48 | +0.1 | |
| 3,551,907 | - | SGL_RS18285 | 0.61 | -0.5 | |
| 3,552,131 | + | SGL_RS18285 | 0.79 | +0.2 | |
| 3,552,167 | + | SGL_RS18285 | 0.82 | -0.2 | |
| 3,552,191 | - | SGL_RS18285 | 0.84 | -0.1 | |
| 3,552,366 | - | -0.8 | |||
| 3,552,370 | + | -0.1 | |||
| 3,552,370 | + | +0.1 | |||
| 3,553,156 | + | +0.1 | |||
| 3,553,351 | + | SGL_RS18295 | 0.31 | -0.5 | |
| 3,553,366 | - | SGL_RS18295 | 0.33 | +0.0 | |
| 3,553,392 | - | SGL_RS18295 | 0.36 | -0.1 | |
| 3,553,489 | - | SGL_RS18295 | 0.48 | -0.3 | |
| 3,553,598 | - | SGL_RS18295 | 0.61 | -0.1 | |
| 3,553,598 | - | SGL_RS18295 | 0.61 | -0.4 | |
| 3,553,656 | + | SGL_RS18295 | 0.68 | +0.3 |
Or see this region's nucleotide sequence