Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS18270
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
3,545,925 | - | SGL_RS18260 | 0.59 | -0.4 | |
3,545,944 | - | SGL_RS18260 | 0.60 | +0.3 | |
3,546,001 | - | SGL_RS18260 | 0.64 | +0.1 | |
3,546,029 | + | SGL_RS18260 | 0.66 | -0.1 | |
3,546,198 | + | SGL_RS18260 | 0.78 | +0.2 | |
3,546,232 | + | SGL_RS18260 | 0.81 | -0.1 | |
3,546,297 | - | SGL_RS18260 | 0.86 | -0.0 | |
3,546,504 | - | +1.0 | |||
3,546,519 | - | -0.1 | |||
3,546,536 | + | +0.6 | |||
3,546,544 | - | -0.0 | |||
3,547,048 | + | SGL_RS18270 | 0.17 | -0.9 | |
3,548,080 | - | SGL_RS18270 | 0.85 | -2.9 | |
3,548,108 | + | SGL_RS18270 | 0.86 | -1.4 | |
3,548,118 | + | SGL_RS18270 | 0.87 | -0.9 | |
3,548,133 | + | SGL_RS18270 | 0.88 | -2.4 | |
3,548,504 | - | +0.7 | |||
3,548,868 | + | SGL_RS18275 | 0.32 | -0.0 | |
3,548,871 | - | SGL_RS18275 | 0.33 | +0.1 | |
3,548,911 | + | SGL_RS18275 | 0.36 | +0.4 | |
3,548,920 | + | SGL_RS18275 | 0.37 | +1.1 | |
3,549,220 | + | SGL_RS18275 | 0.61 | -0.1 | |
3,549,289 | - | SGL_RS18275 | 0.66 | +0.2 |
Or see this region's nucleotide sequence