Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS18090 and SGL_RS18095 are separated by 28 nucleotides SGL_RS18095 and SGL_RS18100 are separated by 121 nucleotides SGL_RS18100 and SGL_RS18105 are separated by 118 nucleotides
SGL_RS18090: SGL_RS18090 - glucose-1-phosphate adenylyltransferase, at 3,516,569 to 3,517,858
_RS18090
SGL_RS18095: SGL_RS18095 - TIGR03943 family protein, at 3,517,887 to 3,518,735
_RS18095
SGL_RS18100: SGL_RS18100 - SH3 domain-containing protein, at 3,518,857 to 3,519,312
_RS18100
SGL_RS18105: SGL_RS18105 - anhydro-N-acetylmuramic acid kinase, at 3,519,431 to 3,520,561
_RS18105
Position (kb)
3518
3519
3520 Strain fitness (log2 ratio)
-1
0
1 at 3517.955 kb on - strand at 3517.982 kb on - strand, within SGL_RS18095 at 3518.184 kb on + strand, within SGL_RS18095 at 3518.250 kb on - strand, within SGL_RS18095 at 3518.395 kb on + strand, within SGL_RS18095 at 3518.519 kb on + strand, within SGL_RS18095 at 3518.527 kb on - strand, within SGL_RS18095 at 3518.599 kb on + strand, within SGL_RS18095 at 3518.616 kb on + strand, within SGL_RS18095 at 3518.624 kb on - strand, within SGL_RS18095 at 3518.722 kb on - strand at 3519.056 kb on - strand, within SGL_RS18100 at 3519.236 kb on + strand, within SGL_RS18100 at 3519.467 kb on - strand at 3519.481 kb on - strand at 3519.508 kb on + strand at 3519.516 kb on - strand at 3519.573 kb on + strand, within SGL_RS18105 at 3519.689 kb on + strand, within SGL_RS18105 at 3519.697 kb on - strand, within SGL_RS18105 at 3519.711 kb on - strand, within SGL_RS18105 at 3519.720 kb on + strand, within SGL_RS18105 at 3519.745 kb on + strand, within SGL_RS18105 at 3519.791 kb on - strand, within SGL_RS18105 at 3519.794 kb on - strand, within SGL_RS18105 at 3519.801 kb on - strand, within SGL_RS18105 at 3520.063 kb on - strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.075 kb on + strand, within SGL_RS18105 at 3520.086 kb on + strand, within SGL_RS18105 at 3520.206 kb on + strand, within SGL_RS18105 at 3520.220 kb on - strand, within SGL_RS18105 at 3520.260 kb on + strand, within SGL_RS18105
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 3,517,955 - +0.1 3,517,982 - SGL_RS18095 0.11 -0.0 3,518,184 + SGL_RS18095 0.35 -1.1 3,518,250 - SGL_RS18095 0.43 -0.7 3,518,395 + SGL_RS18095 0.60 +0.9 3,518,519 + SGL_RS18095 0.74 +0.0 3,518,527 - SGL_RS18095 0.75 -0.2 3,518,599 + SGL_RS18095 0.84 -0.2 3,518,616 + SGL_RS18095 0.86 -0.6 3,518,624 - SGL_RS18095 0.87 +0.3 3,518,722 - +0.8 3,519,056 - SGL_RS18100 0.44 -1.4 3,519,236 + SGL_RS18100 0.83 -0.8 3,519,467 - -0.6 3,519,481 - -0.8 3,519,508 + -0.1 3,519,516 - -0.8 3,519,573 + SGL_RS18105 0.13 -1.1 3,519,689 + SGL_RS18105 0.23 -0.7 3,519,697 - SGL_RS18105 0.24 -0.6 3,519,711 - SGL_RS18105 0.25 -0.6 3,519,720 + SGL_RS18105 0.26 -0.7 3,519,745 + SGL_RS18105 0.28 -0.8 3,519,791 - SGL_RS18105 0.32 -0.8 3,519,794 - SGL_RS18105 0.32 -0.9 3,519,801 - SGL_RS18105 0.33 -0.8 3,520,063 - SGL_RS18105 0.56 -0.6 3,520,075 + SGL_RS18105 0.57 -0.8 3,520,075 + SGL_RS18105 0.57 -0.7 3,520,075 + SGL_RS18105 0.57 -1.4 3,520,086 + SGL_RS18105 0.58 -1.0 3,520,206 + SGL_RS18105 0.69 -1.5 3,520,220 - SGL_RS18105 0.70 -0.4 3,520,260 + SGL_RS18105 0.73 -0.6
Or see this region's nucleotide sequence