Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS17650
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
3,413,916 | + | SGL_RS17645 | 0.53 | -0.6 | |
3,414,052 | - | SGL_RS17645 | 0.61 | +0.3 | |
3,414,075 | + | SGL_RS17645 | 0.63 | +0.4 | |
3,414,485 | + | SGL_RS17645 | 0.88 | +0.3 | |
3,414,631 | - | +0.2 | |||
3,414,662 | + | +0.5 | |||
3,414,664 | + | +0.3 | |||
3,414,797 | + | -0.1 | |||
3,414,803 | - | -0.2 | |||
3,414,814 | + | -0.4 | |||
3,414,838 | + | -0.1 | |||
3,414,902 | + | -4.2 | |||
3,414,910 | - | SGL_RS17650 | 0.11 | -3.6 | |
3,415,045 | + | SGL_RS17650 | 0.31 | -1.4 | |
3,415,093 | + | SGL_RS17650 | 0.38 | -2.5 | |
3,415,257 | + | SGL_RS17650 | 0.61 | -3.7 | |
3,415,424 | + | SGL_RS17650 | 0.85 | -2.7 | |
3,416,017 | + | -0.1 | |||
3,416,017 | + | +0.6 | |||
3,416,017 | + | +0.3 | |||
3,416,017 | + | -0.1 | |||
3,416,191 | + | SGL_RS17655 | 0.15 | -0.8 | |
3,416,191 | + | SGL_RS17655 | 0.15 | -0.0 | |
3,416,199 | - | SGL_RS17655 | 0.16 | +0.0 | |
3,416,199 | - | SGL_RS17655 | 0.16 | +0.2 | |
3,416,264 | + | SGL_RS17655 | 0.23 | -0.1 | |
3,416,454 | + | SGL_RS17655 | 0.45 | +0.2 | |
3,416,474 | - | SGL_RS17655 | 0.48 | -0.2 |
Or see this region's nucleotide sequence