Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15560
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,939,177 | + | SGL_RS15555 | 0.55 | -2.8 | |
| 2,939,737 | + | +0.1 | |||
| 2,940,049 | - | SGL_RS15560 | 0.35 | -2.4 | |
| 2,940,050 | - | SGL_RS15560 | 0.35 | +0.0 | |
| 2,940,141 | + | SGL_RS15560 | 0.47 | -3.5 | |
| 2,940,146 | + | SGL_RS15560 | 0.48 | -2.8 | |
| 2,940,153 | + | SGL_RS15560 | 0.49 | -3.0 | |
| 2,940,368 | - | SGL_RS15560 | 0.79 | -0.5 | |
| 2,940,428 | + | SGL_RS15560 | 0.88 | -2.3 | |
| 2,940,428 | + | SGL_RS15560 | 0.88 | -3.3 | |
| 2,940,627 | - | -0.0 | |||
| 2,940,802 | + | SGL_RS15565 | 0.21 | +0.3 | |
| 2,940,845 | + | SGL_RS15565 | 0.25 | -0.6 | |
| 2,940,853 | + | SGL_RS15565 | 0.26 | +0.2 | |
| 2,941,006 | + | SGL_RS15565 | 0.40 | -1.0 | |
| 2,941,166 | + | SGL_RS15565 | 0.54 | -0.1 | |
| 2,941,280 | - | SGL_RS15565 | 0.65 | -0.1 | |
| 2,941,296 | + | SGL_RS15565 | 0.66 | +0.6 | |
| 2,941,304 | - | SGL_RS15565 | 0.67 | -0.4 |
Or see this region's nucleotide sequence