Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15425
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
2,911,146 | - | -0.2 | |||
2,911,504 | + | SGL_RS15420 | 0.52 | -0.4 | |
2,911,623 | + | SGL_RS15420 | 0.68 | +0.3 | |
2,911,631 | - | SGL_RS15420 | 0.69 | -0.2 | |
2,911,631 | - | SGL_RS15420 | 0.69 | +0.5 | |
2,911,902 | - | +0.3 | |||
2,912,025 | + | -0.6 | |||
2,912,092 | + | +0.5 | |||
2,912,133 | - | SGL_RS15425 | 0.14 | -1.1 | |
2,912,240 | - | SGL_RS15425 | 0.24 | -1.7 | |
2,912,240 | - | SGL_RS15425 | 0.24 | -1.0 | |
2,912,334 | + | SGL_RS15425 | 0.32 | +0.4 | |
2,912,337 | - | SGL_RS15425 | 0.33 | -1.7 | |
2,912,622 | - | SGL_RS15425 | 0.60 | -2.0 | |
2,912,779 | + | SGL_RS15425 | 0.75 | -1.0 | |
2,912,842 | + | SGL_RS15425 | 0.80 | -0.4 | |
2,912,865 | + | SGL_RS15425 | 0.83 | +0.1 | |
2,912,910 | + | SGL_RS15425 | 0.87 | -1.3 | |
2,912,919 | - | SGL_RS15425 | 0.88 | -3.0 | |
2,912,926 | - | SGL_RS15425 | 0.88 | -1.9 | |
2,912,960 | - | -0.8 | |||
2,912,962 | + | -0.9 | |||
2,913,042 | + | -0.0 |
Or see this region's nucleotide sequence