Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15410
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
2,908,643 | + | SGL_RS15405 | 0.39 | +0.1 | |
2,908,698 | - | SGL_RS15405 | 0.43 | -0.1 | |
2,908,717 | - | SGL_RS15405 | 0.45 | -0.2 | |
2,908,717 | - | SGL_RS15405 | 0.45 | +0.0 | |
2,908,774 | - | SGL_RS15405 | 0.50 | +0.2 | |
2,909,070 | - | SGL_RS15405 | 0.74 | -0.0 | |
2,909,108 | + | SGL_RS15405 | 0.77 | -0.3 | |
2,909,126 | + | SGL_RS15405 | 0.79 | -0.1 | |
2,909,306 | + | -0.2 | |||
2,909,314 | - | -0.4 | |||
2,909,321 | - | -0.2 | |||
2,909,322 | - | +0.4 | |||
2,909,334 | + | +0.0 | |||
2,909,334 | + | +0.1 | |||
2,909,334 | + | -0.4 | |||
2,909,344 | - | +0.3 | |||
2,909,345 | + | -1.2 | |||
2,909,345 | + | +0.3 | |||
2,909,353 | - | -0.2 | |||
2,909,370 | + | +0.3 | |||
2,909,378 | - | -0.6 | |||
2,909,423 | - | -0.2 | |||
2,909,623 | - | SGL_RS15410 | 0.42 | -1.4 | |
2,909,650 | + | SGL_RS15410 | 0.51 | -1.5 | |
2,910,217 | - | SGL_RS15415 | 0.26 | -0.4 | |
2,910,365 | + | SGL_RS15415 | 0.42 | +0.8 | |
2,910,606 | + | SGL_RS15415 | 0.69 | +0.5 |
Or see this region's nucleotide sequence