Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15360 and SGL_RS15365 are separated by 8 nucleotides SGL_RS15365 and SGL_RS15370 are separated by 117 nucleotides SGL_RS15370 and SGL_RS15375 are separated by 28 nucleotides SGL_RS15375 and SGL_RS15380 are separated by 161 nucleotides
SGL_RS15360: SGL_RS15360 - aldehyde dehydrogenase family protein, at 2,898,710 to 2,900,080
_RS15360
SGL_RS15365: SGL_RS15365 - TIGR04283 family arsenosugar biosynthesis glycosyltransferase, at 2,900,089 to 2,900,862
_RS15365
SGL_RS15370: SGL_RS15370 - DnaJ C-terminal domain-containing protein, at 2,900,980 to 2,901,978
_RS15370
SGL_RS15375: SGL_RS15375 - class I SAM-dependent methyltransferase, at 2,902,007 to 2,902,669
_RS15375
SGL_RS15380: SGL_RS15380 - SulP family inorganic anion transporter, at 2,902,831 to 2,904,501
_RS15380
Position (kb)
2900
2901
2902 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2900.093 kb on - strand at 2900.249 kb on + strand, within SGL_RS15365 at 2900.256 kb on - strand, within SGL_RS15365 at 2900.260 kb on + strand, within SGL_RS15365 at 2900.312 kb on - strand, within SGL_RS15365 at 2900.708 kb on + strand, within SGL_RS15365 at 2900.796 kb on - strand at 2900.848 kb on - strand at 2900.866 kb on + strand at 2900.877 kb on + strand at 2900.877 kb on + strand at 2900.877 kb on + strand at 2900.879 kb on - strand at 2900.886 kb on - strand at 2901.145 kb on + strand, within SGL_RS15370 at 2901.221 kb on + strand, within SGL_RS15370 at 2901.248 kb on + strand, within SGL_RS15370 at 2901.256 kb on - strand, within SGL_RS15370 at 2901.333 kb on + strand, within SGL_RS15370 at 2901.424 kb on + strand, within SGL_RS15370 at 2901.429 kb on + strand, within SGL_RS15370 at 2901.462 kb on - strand, within SGL_RS15370 at 2901.583 kb on + strand, within SGL_RS15370 at 2901.584 kb on - strand, within SGL_RS15370 at 2901.763 kb on + strand, within SGL_RS15370 at 2901.805 kb on + strand, within SGL_RS15370 at 2901.821 kb on + strand, within SGL_RS15370 at 2902.153 kb on - strand, within SGL_RS15375 at 2902.280 kb on + strand, within SGL_RS15375 at 2902.288 kb on + strand, within SGL_RS15375 at 2902.334 kb on - strand, within SGL_RS15375 at 2902.442 kb on + strand, within SGL_RS15375 at 2902.512 kb on + strand, within SGL_RS15375 at 2902.636 kb on + strand at 2902.721 kb on + strand at 2902.772 kb on + strand at 2902.785 kb on - strand at 2902.835 kb on + strand at 2902.936 kb on + strand at 2902.943 kb on - strand at 2902.949 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,900,093 - +0.2 2,900,249 + SGL_RS15365 0.21 -0.8 2,900,256 - SGL_RS15365 0.22 -0.1 2,900,260 + SGL_RS15365 0.22 -0.1 2,900,312 - SGL_RS15365 0.29 +0.0 2,900,708 + SGL_RS15365 0.80 -0.1 2,900,796 - +0.2 2,900,848 - -0.4 2,900,866 + -0.0 2,900,877 + +0.4 2,900,877 + -0.3 2,900,877 + -0.5 2,900,879 - -0.3 2,900,886 - +0.1 2,901,145 + SGL_RS15370 0.17 -1.2 2,901,221 + SGL_RS15370 0.24 -4.0 2,901,248 + SGL_RS15370 0.27 -0.8 2,901,256 - SGL_RS15370 0.28 -2.2 2,901,333 + SGL_RS15370 0.35 -0.7 2,901,424 + SGL_RS15370 0.44 -2.7 2,901,429 + SGL_RS15370 0.45 -0.3 2,901,462 - SGL_RS15370 0.48 -1.2 2,901,583 + SGL_RS15370 0.60 -2.4 2,901,584 - SGL_RS15370 0.60 -2.1 2,901,763 + SGL_RS15370 0.78 -0.7 2,901,805 + SGL_RS15370 0.83 -0.7 2,901,821 + SGL_RS15370 0.84 -1.9 2,902,153 - SGL_RS15375 0.22 +0.1 2,902,280 + SGL_RS15375 0.41 -0.0 2,902,288 + SGL_RS15375 0.42 -0.2 2,902,334 - SGL_RS15375 0.49 -0.1 2,902,442 + SGL_RS15375 0.66 -0.3 2,902,512 + SGL_RS15375 0.76 -0.5 2,902,636 + +0.2 2,902,721 + +0.2 2,902,772 + +0.0 2,902,785 - -0.0 2,902,835 + +0.4 2,902,936 + +0.1 2,902,943 - -0.2 2,902,949 + -0.3
Or see this region's nucleotide sequence