Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15085 and SGL_RS15095 are separated by 234 nucleotides SGL_RS15095 and SGL_RS15100 overlap by 52 nucleotides
SGL_RS15085: SGL_RS15085 - alanine racemase, at 2,831,881 to 2,833,083
_RS15085
SGL_RS15095: SGL_RS15095 - PAS domain S-box protein, at 2,833,318 to 2,835,867
_RS15095
SGL_RS15100: SGL_RS15100 - SulP family inorganic anion transporter, at 2,835,816 to 2,837,510
_RS15100
Position (kb)
2833
2834
2835
2836 Strain fitness (log2 ratio)
-1
0
1 at 2833.373 kb on + strand at 2833.517 kb on - strand at 2833.713 kb on - strand, within SGL_RS15095 at 2833.916 kb on + strand, within SGL_RS15095 at 2834.949 kb on - strand, within SGL_RS15095 at 2834.949 kb on - strand, within SGL_RS15095 at 2835.139 kb on + strand, within SGL_RS15095 at 2835.205 kb on - strand, within SGL_RS15095 at 2835.247 kb on + strand, within SGL_RS15095 at 2835.374 kb on + strand, within SGL_RS15095 at 2835.382 kb on - strand, within SGL_RS15095 at 2835.382 kb on - strand, within SGL_RS15095 at 2835.487 kb on - strand, within SGL_RS15095 at 2835.509 kb on + strand, within SGL_RS15095 at 2835.510 kb on + strand, within SGL_RS15095 at 2835.569 kb on + strand, within SGL_RS15095 at 2835.754 kb on + strand at 2835.789 kb on + strand at 2835.797 kb on - strand at 2835.812 kb on + strand at 2836.125 kb on - strand, within SGL_RS15100 at 2836.210 kb on - strand, within SGL_RS15100 at 2836.270 kb on + strand, within SGL_RS15100 at 2836.401 kb on + strand, within SGL_RS15100 at 2836.428 kb on - strand, within SGL_RS15100 at 2836.556 kb on - strand, within SGL_RS15100 at 2836.557 kb on + strand, within SGL_RS15100 at 2836.562 kb on + strand, within SGL_RS15100 at 2836.606 kb on - strand, within SGL_RS15100 at 2836.654 kb on + strand, within SGL_RS15100 at 2836.694 kb on - strand, within SGL_RS15100 at 2836.782 kb on + strand, within SGL_RS15100 at 2836.798 kb on + strand, within SGL_RS15100 at 2836.798 kb on + strand, within SGL_RS15100 at 2836.798 kb on + strand, within SGL_RS15100 at 2836.823 kb on - strand, within SGL_RS15100
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,833,373 + +0.1 2,833,517 - +0.2 2,833,713 - SGL_RS15095 0.15 +0.2 2,833,916 + SGL_RS15095 0.23 -0.2 2,834,949 - SGL_RS15095 0.64 -0.1 2,834,949 - SGL_RS15095 0.64 -0.2 2,835,139 + SGL_RS15095 0.71 +0.3 2,835,205 - SGL_RS15095 0.74 +0.2 2,835,247 + SGL_RS15095 0.76 +0.1 2,835,374 + SGL_RS15095 0.81 +0.1 2,835,382 - SGL_RS15095 0.81 -0.5 2,835,382 - SGL_RS15095 0.81 +0.0 2,835,487 - SGL_RS15095 0.85 +0.3 2,835,509 + SGL_RS15095 0.86 -0.0 2,835,510 + SGL_RS15095 0.86 +0.3 2,835,569 + SGL_RS15095 0.88 -0.2 2,835,754 + +0.4 2,835,789 + +1.2 2,835,797 - +0.8 2,835,812 + +0.2 2,836,125 - SGL_RS15100 0.18 +0.2 2,836,210 - SGL_RS15100 0.23 +0.3 2,836,270 + SGL_RS15100 0.27 -0.8 2,836,401 + SGL_RS15100 0.35 +0.3 2,836,428 - SGL_RS15100 0.36 -0.5 2,836,556 - SGL_RS15100 0.44 -0.4 2,836,557 + SGL_RS15100 0.44 -0.2 2,836,562 + SGL_RS15100 0.44 -0.5 2,836,606 - SGL_RS15100 0.47 -0.2 2,836,654 + SGL_RS15100 0.49 -0.2 2,836,694 - SGL_RS15100 0.52 +0.4 2,836,782 + SGL_RS15100 0.57 +0.1 2,836,798 + SGL_RS15100 0.58 +0.2 2,836,798 + SGL_RS15100 0.58 +0.7 2,836,798 + SGL_RS15100 0.58 -0.3 2,836,823 - SGL_RS15100 0.59 +0.4
Or see this region's nucleotide sequence