Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14040 and SGL_RS14045 are separated by 191 nucleotides SGL_RS14045 and SGL_RS14050 are separated by 163 nucleotides SGL_RS14050 and SGL_RS14055 are separated by 116 nucleotides
SGL_RS14040: SGL_RS14040 - excinuclease ABC subunit UvrB, at 2,610,706 to 2,612,715
_RS14040
SGL_RS14045: SGL_RS14045 - hypothetical protein, at 2,612,907 to 2,613,317
_RS14045
SGL_RS14050: SGL_RS14050 - photosystem II reaction center X protein, at 2,613,481 to 2,613,600
_RS14050
SGL_RS14055: SGL_RS14055 - phosphoribosylglycinamide formyltransferase, at 2,613,717 to 2,614,370
_RS14055
Position (kb)
2612
2613
2614 Strain fitness (log2 ratio)
-2
-1
0
1 at 2612.281 kb on - strand, within SGL_RS14040 at 2612.301 kb on + strand, within SGL_RS14040 at 2612.309 kb on - strand, within SGL_RS14040 at 2612.457 kb on - strand, within SGL_RS14040 at 2612.558 kb on + strand at 2612.795 kb on - strand at 2612.940 kb on - strand at 2613.057 kb on - strand, within SGL_RS14045 at 2613.069 kb on + strand, within SGL_RS14045 at 2613.216 kb on + strand, within SGL_RS14045 at 2613.224 kb on - strand, within SGL_RS14045 at 2613.224 kb on - strand, within SGL_RS14045 at 2613.315 kb on - strand at 2613.688 kb on - strand at 2613.811 kb on + strand, within SGL_RS14055 at 2613.935 kb on + strand, within SGL_RS14055 at 2613.936 kb on + strand, within SGL_RS14055 at 2613.959 kb on - strand, within SGL_RS14055 at 2614.010 kb on - strand, within SGL_RS14055 at 2614.124 kb on + strand, within SGL_RS14055 at 2614.169 kb on + strand, within SGL_RS14055 at 2614.169 kb on - strand, within SGL_RS14055 at 2614.177 kb on - strand, within SGL_RS14055 at 2614.206 kb on + strand, within SGL_RS14055 at 2614.206 kb on + strand, within SGL_RS14055 at 2614.216 kb on - strand, within SGL_RS14055 at 2614.250 kb on - strand, within SGL_RS14055
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,612,281 - SGL_RS14040 0.78 +0.1 2,612,301 + SGL_RS14040 0.79 -0.1 2,612,309 - SGL_RS14040 0.80 -0.3 2,612,457 - SGL_RS14040 0.87 -0.0 2,612,558 + +0.1 2,612,795 - -1.8 2,612,940 - -1.8 2,613,057 - SGL_RS14045 0.36 -2.5 2,613,069 + SGL_RS14045 0.39 -0.7 2,613,216 + SGL_RS14045 0.75 -2.4 2,613,224 - SGL_RS14045 0.77 -1.0 2,613,224 - SGL_RS14045 0.77 -1.6 2,613,315 - -0.6 2,613,688 - +0.2 2,613,811 + SGL_RS14055 0.14 -0.1 2,613,935 + SGL_RS14055 0.33 -0.3 2,613,936 + SGL_RS14055 0.33 -0.3 2,613,959 - SGL_RS14055 0.37 -0.7 2,614,010 - SGL_RS14055 0.45 -0.1 2,614,124 + SGL_RS14055 0.62 +0.5 2,614,169 + SGL_RS14055 0.69 -0.1 2,614,169 - SGL_RS14055 0.69 +0.2 2,614,177 - SGL_RS14055 0.70 -0.2 2,614,206 + SGL_RS14055 0.75 -0.4 2,614,206 + SGL_RS14055 0.75 -0.2 2,614,216 - SGL_RS14055 0.76 -0.2 2,614,250 - SGL_RS14055 0.81 -0.3
Or see this region's nucleotide sequence