Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14025 and SGL_RS14030 are separated by 454 nucleotides SGL_RS14030 and SGL_RS14035 are separated by 14 nucleotides SGL_RS14035 and SGL_RS14040 are separated by 189 nucleotides
SGL_RS14025: SGL_RS14025 - gamma-glutamyl-phosphate reductase, at 2,606,095 to 2,607,357
_RS14025
SGL_RS14030: SGL_RS14030 - ATP-binding protein, at 2,607,812 to 2,610,058
_RS14030
SGL_RS14035: SGL_RS14035 - response regulator, at 2,610,073 to 2,610,516
_RS14035
SGL_RS14040: SGL_RS14040 - excinuclease ABC subunit UvrB, at 2,610,706 to 2,612,715
_RS14040
Position (kb)
2607
2608
2609
2610
2611 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2606.850 kb on - strand, within SGL_RS14025 at 2606.913 kb on - strand, within SGL_RS14025 at 2607.027 kb on - strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.187 kb on + strand, within SGL_RS14025 at 2607.195 kb on - strand, within SGL_RS14025 at 2607.195 kb on - strand, within SGL_RS14025 at 2607.202 kb on - strand, within SGL_RS14025 at 2607.252 kb on - strand at 2607.252 kb on - strand at 2607.264 kb on + strand at 2607.714 kb on - strand at 2607.796 kb on + strand at 2607.853 kb on + strand at 2607.890 kb on - strand at 2607.900 kb on + strand at 2607.900 kb on - strand at 2607.908 kb on - strand at 2608.039 kb on + strand, within SGL_RS14030 at 2608.072 kb on - strand, within SGL_RS14030 at 2608.183 kb on + strand, within SGL_RS14030 at 2608.183 kb on + strand, within SGL_RS14030 at 2608.191 kb on - strand, within SGL_RS14030 at 2608.228 kb on + strand, within SGL_RS14030 at 2608.238 kb on + strand, within SGL_RS14030 at 2608.354 kb on + strand, within SGL_RS14030 at 2608.417 kb on - strand, within SGL_RS14030 at 2608.528 kb on + strand, within SGL_RS14030 at 2608.583 kb on - strand, within SGL_RS14030 at 2608.608 kb on + strand, within SGL_RS14030 at 2608.659 kb on + strand, within SGL_RS14030 at 2608.695 kb on + strand, within SGL_RS14030 at 2608.918 kb on + strand, within SGL_RS14030 at 2608.981 kb on - strand, within SGL_RS14030 at 2609.232 kb on + strand, within SGL_RS14030 at 2609.239 kb on - strand, within SGL_RS14030 at 2609.588 kb on - strand, within SGL_RS14030 at 2609.645 kb on + strand, within SGL_RS14030 at 2609.829 kb on + strand, within SGL_RS14030 at 2609.854 kb on - strand at 2610.017 kb on - strand at 2610.150 kb on - strand, within SGL_RS14035 at 2610.150 kb on - strand, within SGL_RS14035 at 2610.225 kb on + strand, within SGL_RS14035 at 2610.360 kb on + strand, within SGL_RS14035
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,606,850 - SGL_RS14025 0.60 -0.8 2,606,913 - SGL_RS14025 0.65 +0.0 2,607,027 - SGL_RS14025 0.74 -1.5 2,607,187 + SGL_RS14025 0.86 -2.0 2,607,187 + SGL_RS14025 0.86 -1.2 2,607,187 + SGL_RS14025 0.86 -1.8 2,607,187 + SGL_RS14025 0.86 -0.9 2,607,195 - SGL_RS14025 0.87 -1.6 2,607,195 - SGL_RS14025 0.87 -3.3 2,607,202 - SGL_RS14025 0.88 -1.6 2,607,252 - -1.5 2,607,252 - -1.9 2,607,264 + -1.1 2,607,714 - -0.8 2,607,796 + -1.5 2,607,853 + -1.2 2,607,890 - -1.7 2,607,900 + -1.5 2,607,900 - -1.9 2,607,908 - -2.0 2,608,039 + SGL_RS14030 0.10 -1.8 2,608,072 - SGL_RS14030 0.12 -2.9 2,608,183 + SGL_RS14030 0.17 -0.7 2,608,183 + SGL_RS14030 0.17 -1.4 2,608,191 - SGL_RS14030 0.17 -1.4 2,608,228 + SGL_RS14030 0.19 -1.7 2,608,238 + SGL_RS14030 0.19 -0.2 2,608,354 + SGL_RS14030 0.24 -1.6 2,608,417 - SGL_RS14030 0.27 -1.3 2,608,528 + SGL_RS14030 0.32 -1.4 2,608,583 - SGL_RS14030 0.34 -1.4 2,608,608 + SGL_RS14030 0.35 -0.5 2,608,659 + SGL_RS14030 0.38 -1.7 2,608,695 + SGL_RS14030 0.39 -1.1 2,608,918 + SGL_RS14030 0.49 -1.8 2,608,981 - SGL_RS14030 0.52 -1.3 2,609,232 + SGL_RS14030 0.63 -2.1 2,609,239 - SGL_RS14030 0.64 -2.9 2,609,588 - SGL_RS14030 0.79 -1.2 2,609,645 + SGL_RS14030 0.82 -1.8 2,609,829 + SGL_RS14030 0.90 -0.9 2,609,854 - -1.1 2,610,017 - -1.4 2,610,150 - SGL_RS14035 0.17 -0.3 2,610,150 - SGL_RS14035 0.17 +0.2 2,610,225 + SGL_RS14035 0.34 -0.5 2,610,360 + SGL_RS14035 0.65 -0.8
Or see this region's nucleotide sequence