Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13560
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
2,511,652 | + | SGL_RS13555 | 0.20 | +0.6 | |
2,511,788 | + | SGL_RS13555 | 0.39 | +0.5 | |
2,512,136 | - | SGL_RS13555 | 0.89 | -0.0 | |
2,512,232 | - | +0.3 | |||
2,512,377 | - | +0.9 | |||
2,512,396 | - | +0.3 | |||
2,512,404 | + | +1.8 | |||
2,512,407 | - | +0.3 | |||
2,512,457 | - | +0.0 | |||
2,512,478 | - | -1.1 | |||
2,512,494 | + | -1.4 | |||
2,512,673 | - | SGL_RS13560 | 0.19 | -1.7 | |
2,512,687 | - | SGL_RS13560 | 0.20 | -1.1 | |
2,512,752 | + | SGL_RS13560 | 0.26 | -1.6 | |
2,512,761 | + | SGL_RS13560 | 0.27 | -1.2 | |
2,512,817 | + | SGL_RS13560 | 0.32 | -1.3 | |
2,512,950 | + | SGL_RS13560 | 0.44 | -1.3 | |
2,512,951 | - | SGL_RS13560 | 0.44 | -2.1 | |
2,513,008 | + | SGL_RS13560 | 0.49 | -1.6 | |
2,513,025 | + | SGL_RS13560 | 0.51 | -1.2 | |
2,513,108 | - | SGL_RS13560 | 0.58 | -0.8 | |
2,513,108 | - | SGL_RS13560 | 0.58 | -1.4 | |
2,513,403 | + | SGL_RS13560 | 0.85 | -2.0 | |
2,513,455 | - | -1.5 | |||
2,513,493 | - | -1.4 | |||
2,513,514 | - | -1.0 | |||
2,513,602 | - | +0.8 | |||
2,513,602 | - | +0.2 | |||
2,513,602 | - | +0.8 |
Or see this region's nucleotide sequence