Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS12925 and SGL_RS12930 are separated by 132 nucleotides SGL_RS12930 and SGL_RS12935 are separated by 181 nucleotides
SGL_RS12925: SGL_RS12925 - AAA family ATPase, at 2,375,539 to 2,377,044
_RS12925
SGL_RS12930: SGL_RS12930 - DUF1257 domain-containing protein, at 2,377,177 to 2,377,527
_RS12930
SGL_RS12935: SGL_RS12935 - hypothetical protein, at 2,377,709 to 2,378,938
_RS12935
Position (kb)
2377
2378 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2376.212 kb on - strand, within SGL_RS12925 at 2376.221 kb on + strand, within SGL_RS12925 at 2376.317 kb on - strand, within SGL_RS12925 at 2376.417 kb on + strand, within SGL_RS12925 at 2376.428 kb on + strand, within SGL_RS12925 at 2376.519 kb on + strand, within SGL_RS12925 at 2376.854 kb on - strand, within SGL_RS12925 at 2376.931 kb on - strand at 2376.947 kb on + strand at 2376.955 kb on - strand at 2376.957 kb on - strand at 2377.389 kb on + strand, within SGL_RS12930 at 2377.397 kb on - strand, within SGL_RS12930 at 2377.397 kb on - strand, within SGL_RS12930 at 2377.475 kb on + strand, within SGL_RS12930 at 2377.574 kb on + strand at 2377.616 kb on + strand at 2377.732 kb on + strand at 2377.735 kb on - strand at 2377.740 kb on - strand at 2377.757 kb on - strand at 2377.992 kb on - strand, within SGL_RS12935 at 2378.030 kb on - strand, within SGL_RS12935 at 2378.111 kb on + strand, within SGL_RS12935 at 2378.159 kb on + strand, within SGL_RS12935 at 2378.159 kb on + strand, within SGL_RS12935 at 2378.272 kb on + strand, within SGL_RS12935 at 2378.280 kb on - strand, within SGL_RS12935 at 2378.391 kb on - strand, within SGL_RS12935 at 2378.467 kb on - strand, within SGL_RS12935 at 2378.469 kb on + strand, within SGL_RS12935
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,376,212 - SGL_RS12925 0.45 -4.3 2,376,221 + SGL_RS12925 0.45 -3.5 2,376,317 - SGL_RS12925 0.52 -3.3 2,376,417 + SGL_RS12925 0.58 -2.2 2,376,428 + SGL_RS12925 0.59 -1.0 2,376,519 + SGL_RS12925 0.65 -5.3 2,376,854 - SGL_RS12925 0.87 -1.8 2,376,931 - -1.9 2,376,947 + -4.0 2,376,955 - -3.1 2,376,957 - -3.3 2,377,389 + SGL_RS12930 0.60 -2.6 2,377,397 - SGL_RS12930 0.63 -1.3 2,377,397 - SGL_RS12930 0.63 -1.2 2,377,475 + SGL_RS12930 0.85 +1.9 2,377,574 + -0.8 2,377,616 + +0.2 2,377,732 + +0.4 2,377,735 - -0.4 2,377,740 - +0.1 2,377,757 - -0.2 2,377,992 - SGL_RS12935 0.23 -0.4 2,378,030 - SGL_RS12935 0.26 +0.2 2,378,111 + SGL_RS12935 0.33 +0.1 2,378,159 + SGL_RS12935 0.37 -0.0 2,378,159 + SGL_RS12935 0.37 -0.1 2,378,272 + SGL_RS12935 0.46 -0.2 2,378,280 - SGL_RS12935 0.46 -0.3 2,378,391 - SGL_RS12935 0.55 +0.1 2,378,467 - SGL_RS12935 0.62 +1.0 2,378,469 + SGL_RS12935 0.62 +0.2
Or see this region's nucleotide sequence