Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12335
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
2,227,547 | - | +0.3 | |||
2,227,609 | - | -1.1 | |||
2,227,816 | - | +0.0 | |||
2,228,171 | + | SGL_RS12335 | 0.62 | -2.6 | |
2,228,205 | + | SGL_RS12335 | 0.68 | -2.4 | |
2,228,213 | + | SGL_RS12335 | 0.70 | -2.5 | |
2,228,213 | + | SGL_RS12335 | 0.70 | -2.6 | |
2,228,218 | + | SGL_RS12335 | 0.71 | -2.2 | |
2,228,218 | + | SGL_RS12335 | 0.71 | -3.6 | |
2,228,221 | - | SGL_RS12335 | 0.71 | -3.0 | |
2,228,243 | - | SGL_RS12335 | 0.75 | -2.3 | |
2,228,247 | + | SGL_RS12335 | 0.76 | -4.4 | |
2,228,271 | - | SGL_RS12335 | 0.81 | -3.4 | |
2,228,431 | + | -1.0 | |||
2,228,473 | - | -0.0 | |||
2,228,538 | + | -0.9 | |||
2,228,715 | + | SGL_RS12340 | 0.14 | -0.6 | |
2,228,755 | + | SGL_RS12340 | 0.16 | -1.0 | |
2,228,815 | + | SGL_RS12340 | 0.20 | -0.6 | |
2,228,857 | - | SGL_RS12340 | 0.22 | -1.3 | |
2,228,952 | + | SGL_RS12340 | 0.27 | +0.0 | |
2,229,190 | - | SGL_RS12340 | 0.40 | -1.4 | |
2,229,216 | + | SGL_RS12340 | 0.41 | -0.7 |
Or see this region's nucleotide sequence