Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11520 and SGL_RS11525 are separated by 135 nucleotides SGL_RS11525 and SGL_RS11530 are separated by 0 nucleotides SGL_RS11530 and SGL_RS11535 are separated by 124 nucleotides SGL_RS11535 and SGL_RS11540 are separated by 99 nucleotides
SGL_RS11520: SGL_RS11520 - molybdopterin-synthase adenylyltransferase MoeB, at 2,040,280 to 2,041,458
_RS11520
SGL_RS11525: SGL_RS11525 - DUF2237 family protein, at 2,041,594 to 2,041,998
_RS11525
SGL_RS11530: SGL_RS11530 - RluA family pseudouridine synthase, at 2,041,999 to 2,042,982
_RS11530
SGL_RS11535: SGL_RS11535 - sugar transferase, at 2,043,107 to 2,043,838
_RS11535
SGL_RS11540: SGL_RS11540 - glycosyltransferase, at 2,043,938 to 2,045,074
_RS11540
Position (kb)
2041
2042
2043 Strain fitness (log2 ratio)
-2
-1
0
1 at 2041.617 kb on + strand at 2041.850 kb on - strand, within SGL_RS11525 at 2042.037 kb on - strand at 2042.055 kb on + strand at 2042.100 kb on + strand, within SGL_RS11530 at 2042.109 kb on - strand, within SGL_RS11530 at 2042.275 kb on + strand, within SGL_RS11530 at 2042.355 kb on + strand, within SGL_RS11530 at 2042.381 kb on - strand, within SGL_RS11530 at 2042.514 kb on + strand, within SGL_RS11530 at 2042.572 kb on + strand, within SGL_RS11530 at 2042.814 kb on + strand, within SGL_RS11530 at 2042.814 kb on + strand, within SGL_RS11530 at 2042.840 kb on + strand, within SGL_RS11530 at 2042.886 kb on + strand at 2042.888 kb on + strand at 2042.894 kb on - strand at 2043.024 kb on - strand at 2043.060 kb on - strand at 2043.060 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,041,617 + +0.6 2,041,850 - SGL_RS11525 0.63 -0.4 2,042,037 - -0.1 2,042,055 + -0.2 2,042,100 + SGL_RS11530 0.10 -1.3 2,042,109 - SGL_RS11530 0.11 -0.7 2,042,275 + SGL_RS11530 0.28 -0.8 2,042,355 + SGL_RS11530 0.36 -1.0 2,042,381 - SGL_RS11530 0.39 -2.2 2,042,514 + SGL_RS11530 0.52 -0.6 2,042,572 + SGL_RS11530 0.58 -0.8 2,042,814 + SGL_RS11530 0.83 -1.4 2,042,814 + SGL_RS11530 0.83 -1.7 2,042,840 + SGL_RS11530 0.85 -1.3 2,042,886 + -0.7 2,042,888 + -0.9 2,042,894 - -0.6 2,043,024 - -0.1 2,043,060 - -0.2 2,043,060 - +0.1
Or see this region's nucleotide sequence