Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11500 and SGL_RS11505 are separated by 116 nucleotides SGL_RS11505 and SGL_RS11510 are separated by 14 nucleotides SGL_RS11510 and SGL_RS11515 are separated by 10 nucleotides SGL_RS11515 and SGL_RS11520 are separated by 118 nucleotides
SGL_RS11500: SGL_RS11500 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 2,036,911 to 2,038,527
_RS11500
SGL_RS11505: SGL_RS11505 - NUDIX domain-containing protein, at 2,038,644 to 2,039,063
_RS11505
SGL_RS11510: SGL_RS11510 - dihydroneopterin aldolase, at 2,039,078 to 2,039,530
_RS11510
SGL_RS11515: SGL_RS11515 - LysE family transporter, at 2,039,541 to 2,040,161
_RS11515
SGL_RS11520: SGL_RS11520 - molybdopterin-synthase adenylyltransferase MoeB, at 2,040,280 to 2,041,458
_RS11520
Position (kb)
2039
2040 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2038.132 kb on - strand, within SGL_RS11500 at 2038.204 kb on + strand, within SGL_RS11500 at 2038.204 kb on + strand, within SGL_RS11500 at 2038.212 kb on - strand, within SGL_RS11500 at 2038.251 kb on + strand, within SGL_RS11500 at 2038.327 kb on + strand, within SGL_RS11500 at 2038.887 kb on + strand, within SGL_RS11505 at 2038.969 kb on - strand, within SGL_RS11505 at 2039.227 kb on - strand, within SGL_RS11510 at 2039.277 kb on + strand, within SGL_RS11510 at 2039.292 kb on + strand, within SGL_RS11510 at 2039.300 kb on - strand, within SGL_RS11510 at 2039.377 kb on + strand, within SGL_RS11510 at 2039.661 kb on - strand, within SGL_RS11515 at 2039.875 kb on + strand, within SGL_RS11515 at 2039.934 kb on + strand, within SGL_RS11515 at 2040.002 kb on - strand, within SGL_RS11515 at 2040.074 kb on - strand, within SGL_RS11515 at 2040.278 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,038,132 - SGL_RS11500 0.76 -0.1 2,038,204 + SGL_RS11500 0.80 -0.2 2,038,204 + SGL_RS11500 0.80 -0.3 2,038,212 - SGL_RS11500 0.80 -0.5 2,038,251 + SGL_RS11500 0.83 -0.5 2,038,327 + SGL_RS11500 0.88 -0.5 2,038,887 + SGL_RS11505 0.58 -0.2 2,038,969 - SGL_RS11505 0.77 -0.2 2,039,227 - SGL_RS11510 0.33 -4.2 2,039,277 + SGL_RS11510 0.44 -1.1 2,039,292 + SGL_RS11510 0.47 -3.0 2,039,300 - SGL_RS11510 0.49 -0.9 2,039,377 + SGL_RS11510 0.66 -2.2 2,039,661 - SGL_RS11515 0.19 +0.2 2,039,875 + SGL_RS11515 0.54 -0.3 2,039,934 + SGL_RS11515 0.63 +0.1 2,040,002 - SGL_RS11515 0.74 -0.2 2,040,074 - SGL_RS11515 0.86 +0.3 2,040,278 + +0.1
Or see this region's nucleotide sequence