Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11485 and SGL_RS11490 are separated by 263 nucleotides SGL_RS11490 and SGL_RS11495 are separated by 41 nucleotides SGL_RS11495 and SGL_RS11500 are separated by 60 nucleotides
SGL_RS11485: SGL_RS11485 - inorganic diphosphatase, at 2,034,294 to 2,034,803
_RS11485
SGL_RS11490: SGL_RS11490 - NAD(P)H-quinone oxidoreductase subunit M, at 2,035,067 to 2,035,432
_RS11490
SGL_RS11495: SGL_RS11495 - Ig-like domain-containing protein, at 2,035,474 to 2,036,850
_RS11495
SGL_RS11500: SGL_RS11500 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 2,036,911 to 2,038,527
_RS11500
Position (kb)
2035
2036
2037 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2034.772 kb on + strand at 2034.819 kb on + strand at 2034.905 kb on - strand at 2035.464 kb on + strand at 2035.464 kb on + strand at 2035.472 kb on - strand at 2035.472 kb on - strand at 2035.472 kb on - strand at 2035.474 kb on + strand at 2035.530 kb on + strand at 2035.538 kb on - strand at 2035.543 kb on - strand at 2035.547 kb on + strand at 2035.687 kb on + strand, within SGL_RS11495 at 2035.708 kb on - strand, within SGL_RS11495 at 2035.884 kb on - strand, within SGL_RS11495 at 2036.052 kb on + strand, within SGL_RS11495 at 2036.619 kb on + strand, within SGL_RS11495 at 2036.671 kb on - strand, within SGL_RS11495 at 2036.767 kb on - strand at 2036.804 kb on + strand at 2036.804 kb on + strand at 2037.138 kb on + strand, within SGL_RS11500 at 2037.266 kb on + strand, within SGL_RS11500 at 2037.283 kb on - strand, within SGL_RS11500 at 2037.297 kb on - strand, within SGL_RS11500 at 2037.483 kb on - strand, within SGL_RS11500 at 2037.596 kb on + strand, within SGL_RS11500 at 2037.829 kb on + strand, within SGL_RS11500
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 2,034,772 + +0.8 2,034,819 + +0.3 2,034,905 - +0.1 2,035,464 + -1.9 2,035,464 + -3.7 2,035,472 - -1.1 2,035,472 - -5.1 2,035,472 - -2.8 2,035,474 + -1.8 2,035,530 + -1.7 2,035,538 - -0.1 2,035,543 - -4.5 2,035,547 + -2.7 2,035,687 + SGL_RS11495 0.15 -1.8 2,035,708 - SGL_RS11495 0.17 -1.9 2,035,884 - SGL_RS11495 0.30 -3.2 2,036,052 + SGL_RS11495 0.42 -1.6 2,036,619 + SGL_RS11495 0.83 +0.3 2,036,671 - SGL_RS11495 0.87 +0.1 2,036,767 - -0.5 2,036,804 + -0.2 2,036,804 + -0.3 2,037,138 + SGL_RS11500 0.14 -0.5 2,037,266 + SGL_RS11500 0.22 -0.1 2,037,283 - SGL_RS11500 0.23 -0.4 2,037,297 - SGL_RS11500 0.24 -0.7 2,037,483 - SGL_RS11500 0.35 -0.4 2,037,596 + SGL_RS11500 0.42 -0.3 2,037,829 + SGL_RS11500 0.57 -0.6
Or see this region's nucleotide sequence