Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS11025
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,935,607 | + | -0.3 | |||
1,935,698 | - | -0.0 | |||
1,935,698 | - | -0.4 | |||
1,935,832 | + | +0.2 | |||
1,935,895 | - | -0.2 | |||
1,936,031 | + | SGL_RS11025 | 0.10 | -1.6 | |
1,936,124 | - | SGL_RS11025 | 0.18 | -2.7 | |
1,936,232 | - | SGL_RS11025 | 0.28 | -2.8 | |
1,936,362 | + | SGL_RS11025 | 0.39 | +0.1 | |
1,936,362 | + | SGL_RS11025 | 0.39 | -1.8 | |
1,936,370 | - | SGL_RS11025 | 0.40 | -2.1 | |
1,936,370 | - | SGL_RS11025 | 0.40 | -2.4 | |
1,936,370 | - | SGL_RS11025 | 0.40 | -1.9 | |
1,936,621 | - | SGL_RS11025 | 0.61 | -3.5 | |
1,936,655 | - | SGL_RS11025 | 0.64 | -1.8 | |
1,936,725 | - | SGL_RS11025 | 0.70 | -2.3 | |
1,936,815 | + | SGL_RS11025 | 0.78 | -1.3 | |
1,937,474 | + | -0.2 | |||
1,937,641 | + | SGL_RS11035 | 0.20 | -2.9 | |
1,937,902 | - | SGL_RS11035 | 0.51 | -1.7 | |
1,937,978 | + | SGL_RS11035 | 0.60 | -0.5 |
Or see this region's nucleotide sequence