Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS10320
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,787,647 | + | SGL_RS10315 | 0.72 | +0.1 | |
1,787,675 | - | SGL_RS10315 | 0.73 | +0.4 | |
1,787,776 | - | SGL_RS10315 | 0.77 | +0.7 | |
1,787,847 | + | SGL_RS10315 | 0.80 | +0.7 | |
1,787,871 | - | SGL_RS10315 | 0.81 | -0.3 | |
1,788,071 | - | SGL_RS10315 | 0.89 | +0.3 | |
1,788,071 | - | SGL_RS10315 | 0.89 | +0.1 | |
1,788,144 | - | +0.3 | |||
1,788,202 | + | +0.1 | |||
1,788,202 | + | +0.2 | |||
1,788,289 | + | +0.6 | |||
1,788,296 | + | -0.0 | |||
1,789,021 | + | SGL_RS10320 | 0.35 | -2.9 | |
1,789,100 | + | SGL_RS10320 | 0.40 | -1.0 | |
1,789,178 | + | SGL_RS10320 | 0.46 | -3.6 | |
1,789,186 | - | SGL_RS10320 | 0.47 | -3.6 | |
1,789,369 | - | SGL_RS10320 | 0.60 | -2.6 | |
1,789,550 | + | SGL_RS10320 | 0.74 | -2.3 | |
1,789,972 | + | -0.2 | |||
1,790,038 | - | -0.2 | |||
1,790,232 | + | -0.0 | |||
1,790,253 | - | +0.5 | |||
1,790,293 | + | +0.8 | |||
1,790,538 | + | SGL_RS10325 | 0.27 | +0.7 | |
1,790,639 | - | SGL_RS10325 | 0.36 | +0.4 | |
1,790,745 | + | SGL_RS10325 | 0.46 | +0.2 | |
1,790,846 | + | SGL_RS10325 | 0.55 | +0.4 | |
1,790,874 | + | SGL_RS10325 | 0.57 | +0.3 | |
1,790,889 | - | SGL_RS10325 | 0.58 | +0.5 |
Or see this region's nucleotide sequence