Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10290 and SGL_RS10295 overlap by 4 nucleotides SGL_RS10295 and SGL_RS10300 are separated by 86 nucleotides SGL_RS10300 and SGL_RS10305 are separated by 182 nucleotides
SGL_RS10290: SGL_RS10290 - M48 family metalloprotease, at 1,781,209 to 1,782,060
_RS10290
SGL_RS10295: SGL_RS10295 - GAF domain-containing protein, at 1,782,057 to 1,783,355
_RS10295
SGL_RS10300: SGL_RS10300 - hypothetical protein, at 1,783,442 to 1,783,672
_RS10300
SGL_RS10305: SGL_RS10305 - PIN/TRAM domain-containing protein, at 1,783,855 to 1,784,934
_RS10305
Position (kb)
1782
1783
1784 Strain fitness (log2 ratio)
-2
-1
0
1 at 1781.498 kb on - strand, within SGL_RS10290 at 1781.511 kb on + strand, within SGL_RS10290 at 1781.519 kb on - strand, within SGL_RS10290 at 1781.697 kb on - strand, within SGL_RS10290 at 1781.776 kb on - strand, within SGL_RS10290 at 1781.776 kb on - strand, within SGL_RS10290 at 1781.778 kb on + strand, within SGL_RS10290 at 1781.842 kb on + strand, within SGL_RS10290 at 1781.851 kb on - strand, within SGL_RS10290 at 1781.921 kb on + strand, within SGL_RS10290 at 1781.933 kb on + strand, within SGL_RS10290 at 1781.948 kb on + strand, within SGL_RS10290 at 1781.990 kb on - strand at 1782.354 kb on + strand, within SGL_RS10295 at 1782.364 kb on - strand, within SGL_RS10295 at 1782.411 kb on + strand, within SGL_RS10295 at 1782.563 kb on - strand, within SGL_RS10295 at 1782.786 kb on + strand, within SGL_RS10295 at 1782.821 kb on - strand, within SGL_RS10295 at 1782.840 kb on + strand, within SGL_RS10295 at 1782.967 kb on - strand, within SGL_RS10295 at 1782.987 kb on + strand, within SGL_RS10295 at 1783.008 kb on - strand, within SGL_RS10295 at 1783.193 kb on + strand, within SGL_RS10295 at 1783.364 kb on + strand at 1783.377 kb on + strand at 1783.574 kb on + strand, within SGL_RS10300 at 1783.910 kb on - strand at 1784.226 kb on + strand, within SGL_RS10305 at 1784.249 kb on + strand, within SGL_RS10305 at 1784.318 kb on + strand, within SGL_RS10305
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 1,781,498 - SGL_RS10290 0.34 -0.0 1,781,511 + SGL_RS10290 0.35 +0.2 1,781,519 - SGL_RS10290 0.36 -0.2 1,781,697 - SGL_RS10290 0.57 -0.2 1,781,776 - SGL_RS10290 0.67 -0.6 1,781,776 - SGL_RS10290 0.67 -0.5 1,781,778 + SGL_RS10290 0.67 -0.1 1,781,842 + SGL_RS10290 0.74 -0.2 1,781,851 - SGL_RS10290 0.75 -0.3 1,781,921 + SGL_RS10290 0.84 +0.3 1,781,933 + SGL_RS10290 0.85 +0.2 1,781,948 + SGL_RS10290 0.87 +0.1 1,781,990 - -0.1 1,782,354 + SGL_RS10295 0.23 -1.1 1,782,364 - SGL_RS10295 0.24 -0.6 1,782,411 + SGL_RS10295 0.27 -2.2 1,782,563 - SGL_RS10295 0.39 -0.2 1,782,786 + SGL_RS10295 0.56 -1.8 1,782,821 - SGL_RS10295 0.59 +0.1 1,782,840 + SGL_RS10295 0.60 -1.6 1,782,967 - SGL_RS10295 0.70 -0.7 1,782,987 + SGL_RS10295 0.72 -1.3 1,783,008 - SGL_RS10295 0.73 -1.2 1,783,193 + SGL_RS10295 0.87 -2.3 1,783,364 + -0.9 1,783,377 + -1.3 1,783,574 + SGL_RS10300 0.57 -1.7 1,783,910 - -2.0 1,784,226 + SGL_RS10305 0.34 -1.2 1,784,249 + SGL_RS10305 0.36 -1.3 1,784,318 + SGL_RS10305 0.43 -0.8
Or see this region's nucleotide sequence