Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08790
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,476,753 | + | +0.1 | |||
1,476,783 | - | -0.4 | |||
1,476,791 | + | +0.1 | |||
1,476,799 | - | -0.2 | |||
1,476,814 | + | +0.7 | |||
1,476,952 | - | SGL_RS08790 | 0.13 | -1.9 | |
1,477,040 | + | SGL_RS08790 | 0.24 | -1.7 | |
1,477,142 | + | SGL_RS08790 | 0.37 | -1.3 | |
1,477,501 | + | SGL_RS08790 | 0.81 | -1.6 | |
1,477,634 | - | -1.6 | |||
1,477,685 | - | +0.0 | |||
1,477,773 | + | SGL_RS08795 | 0.10 | -0.8 | |
1,477,901 | - | SGL_RS08795 | 0.20 | -0.1 | |
1,477,942 | - | SGL_RS08795 | 0.24 | -0.2 | |
1,478,127 | - | SGL_RS08795 | 0.39 | +0.3 | |
1,478,143 | - | SGL_RS08795 | 0.40 | +0.5 | |
1,478,214 | - | SGL_RS08795 | 0.46 | -1.4 | |
1,478,273 | + | SGL_RS08795 | 0.50 | -0.1 | |
1,478,370 | - | SGL_RS08795 | 0.58 | -0.4 | |
1,478,477 | - | SGL_RS08795 | 0.67 | -0.3 | |
1,478,545 | + | SGL_RS08795 | 0.72 | +0.1 |
Or see this region's nucleotide sequence