Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08650
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,444,901 | - | SGL_RS08640 | 0.62 | -0.4 | |
1,444,943 | + | SGL_RS08640 | 0.65 | -0.8 | |
1,444,946 | - | SGL_RS08640 | 0.65 | -0.3 | |
1,444,951 | - | SGL_RS08640 | 0.65 | -0.7 | |
1,444,951 | - | SGL_RS08640 | 0.65 | -0.7 | |
1,445,305 | - | -0.9 | |||
1,445,381 | + | -0.9 | |||
1,445,395 | - | +0.3 | |||
1,445,582 | + | SGL_RS18805 | 0.38 | -0.4 | |
1,445,612 | + | SGL_RS18805 | 0.45 | +0.5 | |
1,446,303 | + | SGL_RS08650 | 0.44 | -2.1 | |
1,446,347 | - | SGL_RS08650 | 0.49 | -1.2 | |
1,446,347 | - | SGL_RS08650 | 0.49 | -1.4 | |
1,446,397 | + | SGL_RS08650 | 0.54 | -2.9 | |
1,446,699 | - | SGL_RS08650 | 0.85 | -2.0 | |
1,446,712 | - | SGL_RS08650 | 0.87 | -1.0 | |
1,446,795 | - | -0.0 |
Or see this region's nucleotide sequence