Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08490 and SGL_RS08495 are separated by 195 nucleotides SGL_RS08495 and SGL_RS08500 are separated by 27 nucleotides
SGL_RS08490: SGL_RS08490 - sulfite exporter TauE/SafE family protein, at 1,405,981 to 1,406,847
_RS08490
SGL_RS08495: SGL_RS08495 - DUF3370 domain-containing protein, at 1,407,043 to 1,408,455
_RS08495
SGL_RS08500: SGL_RS08500 - GntR family transcriptional regulator, at 1,408,483 to 1,409,649
_RS08500
Position (kb)
1407
1408
1409 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1406.186 kb on - strand, within SGL_RS08490 at 1406.201 kb on - strand, within SGL_RS08490 at 1406.243 kb on + strand, within SGL_RS08490 at 1406.252 kb on - strand, within SGL_RS08490 at 1406.363 kb on + strand, within SGL_RS08490 at 1406.388 kb on + strand, within SGL_RS08490 at 1406.433 kb on + strand, within SGL_RS08490 at 1406.441 kb on + strand, within SGL_RS08490 at 1406.469 kb on + strand, within SGL_RS08490 at 1406.568 kb on + strand, within SGL_RS08490 at 1406.827 kb on - strand at 1406.907 kb on + strand at 1407.141 kb on + strand at 1407.183 kb on + strand at 1407.283 kb on + strand, within SGL_RS08495 at 1407.291 kb on - strand, within SGL_RS08495 at 1407.337 kb on + strand, within SGL_RS08495 at 1407.360 kb on + strand, within SGL_RS08495 at 1407.386 kb on + strand, within SGL_RS08495 at 1407.536 kb on + strand, within SGL_RS08495 at 1407.761 kb on + strand, within SGL_RS08495 at 1407.765 kb on - strand, within SGL_RS08495 at 1407.774 kb on + strand, within SGL_RS08495 at 1407.874 kb on + strand, within SGL_RS08495 at 1408.023 kb on + strand, within SGL_RS08495 at 1408.042 kb on - strand, within SGL_RS08495 at 1408.070 kb on - strand, within SGL_RS08495 at 1408.076 kb on - strand, within SGL_RS08495 at 1408.269 kb on + strand, within SGL_RS08495 at 1408.277 kb on - strand, within SGL_RS08495 at 1408.355 kb on + strand at 1408.377 kb on + strand at 1408.385 kb on - strand at 1408.395 kb on - strand at 1408.395 kb on - strand at 1408.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 1,406,186 - SGL_RS08490 0.24 -0.1 1,406,201 - SGL_RS08490 0.25 +0.1 1,406,243 + SGL_RS08490 0.30 +0.6 1,406,252 - SGL_RS08490 0.31 -0.3 1,406,363 + SGL_RS08490 0.44 +0.4 1,406,388 + SGL_RS08490 0.47 -0.0 1,406,433 + SGL_RS08490 0.52 +0.1 1,406,441 + SGL_RS08490 0.53 +0.7 1,406,469 + SGL_RS08490 0.56 +0.2 1,406,568 + SGL_RS08490 0.68 -0.1 1,406,827 - -0.1 1,406,907 + -0.2 1,407,141 + -2.5 1,407,183 + -0.6 1,407,283 + SGL_RS08495 0.17 -1.7 1,407,291 - SGL_RS08495 0.18 -1.8 1,407,337 + SGL_RS08495 0.21 -0.7 1,407,360 + SGL_RS08495 0.22 -1.5 1,407,386 + SGL_RS08495 0.24 +0.3 1,407,536 + SGL_RS08495 0.35 -2.0 1,407,761 + SGL_RS08495 0.51 -1.6 1,407,765 - SGL_RS08495 0.51 -1.3 1,407,774 + SGL_RS08495 0.52 -0.7 1,407,874 + SGL_RS08495 0.59 -1.4 1,408,023 + SGL_RS08495 0.69 -2.2 1,408,042 - SGL_RS08495 0.71 -2.2 1,408,070 - SGL_RS08495 0.73 -1.1 1,408,076 - SGL_RS08495 0.73 -0.3 1,408,269 + SGL_RS08495 0.87 -1.9 1,408,277 - SGL_RS08495 0.87 -2.6 1,408,355 + -2.4 1,408,377 + -1.5 1,408,385 - -0.8 1,408,395 - -1.1 1,408,395 - -2.8 1,408,481 + +0.3
Or see this region's nucleotide sequence