Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08070 and SGL_RS08075 are separated by 71 nucleotides SGL_RS08075 and SGL_RS08080 are separated by 310 nucleotides SGL_RS08080 and SGL_RS08085 are separated by 15 nucleotides SGL_RS08085 and SGL_RS08090 are separated by 253 nucleotides
SGL_RS08070: SGL_RS08070 - tocopherol cyclase family protein, at 1,323,672 to 1,324,763
_RS08070
SGL_RS08075: SGL_RS08075 - peroxiredoxin, at 1,324,835 to 1,325,404
_RS08075
SGL_RS08080: SGL_RS08080 - Fur family transcriptional regulator, at 1,325,715 to 1,326,134
_RS08080
SGL_RS08085: SGL_RS08085 - DUF1499 domain-containing protein, at 1,326,150 to 1,326,626
_RS08085
SGL_RS08090: SGL_RS08090 - photosystem II reaction center protein Psb28, at 1,326,880 to 1,327,248
_RS08090
Position (kb)
1325
1326
1327 Strain fitness (log2 ratio)
-2
-1
0
1 at 1324.762 kb on + strand at 1324.766 kb on + strand at 1324.776 kb on + strand at 1324.789 kb on - strand at 1324.812 kb on - strand at 1324.841 kb on - strand at 1324.903 kb on - strand, within SGL_RS08075 at 1324.903 kb on - strand, within SGL_RS08075 at 1324.943 kb on + strand, within SGL_RS08075 at 1325.025 kb on - strand, within SGL_RS08075 at 1325.238 kb on + strand, within SGL_RS08075 at 1325.265 kb on + strand, within SGL_RS08075 at 1325.619 kb on + strand at 1325.624 kb on + strand at 1325.632 kb on - strand at 1325.632 kb on - strand at 1325.718 kb on + strand at 1325.718 kb on + strand at 1325.790 kb on - strand, within SGL_RS08080 at 1325.886 kb on + strand, within SGL_RS08080 at 1325.886 kb on + strand, within SGL_RS08080 at 1325.894 kb on - strand, within SGL_RS08080 at 1325.897 kb on + strand, within SGL_RS08080 at 1326.359 kb on + strand, within SGL_RS08085 at 1326.455 kb on + strand, within SGL_RS08085 at 1326.575 kb on - strand, within SGL_RS08085 at 1326.652 kb on + strand at 1326.735 kb on + strand at 1326.791 kb on + strand at 1326.793 kb on + strand at 1326.835 kb on + strand at 1326.887 kb on + strand at 1326.946 kb on - strand, within SGL_RS08090 at 1326.979 kb on + strand, within SGL_RS08090 at 1326.987 kb on - strand, within SGL_RS08090 at 1327.017 kb on + strand, within SGL_RS08090
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 1,324,762 + -0.1 1,324,766 + -0.7 1,324,776 + -0.2 1,324,789 - -0.4 1,324,812 - -0.6 1,324,841 - -0.5 1,324,903 - SGL_RS08075 0.12 -0.7 1,324,903 - SGL_RS08075 0.12 -0.9 1,324,943 + SGL_RS08075 0.19 -0.2 1,325,025 - SGL_RS08075 0.33 +0.3 1,325,238 + SGL_RS08075 0.71 -0.4 1,325,265 + SGL_RS08075 0.75 -0.5 1,325,619 + +0.2 1,325,624 + -0.5 1,325,632 - -0.4 1,325,632 - +0.7 1,325,718 + -1.4 1,325,718 + -0.7 1,325,790 - SGL_RS08080 0.18 -1.7 1,325,886 + SGL_RS08080 0.41 -1.6 1,325,886 + SGL_RS08080 0.41 -2.0 1,325,894 - SGL_RS08080 0.43 -0.6 1,325,897 + SGL_RS08080 0.43 -1.5 1,326,359 + SGL_RS08085 0.44 -0.1 1,326,455 + SGL_RS08085 0.64 +0.4 1,326,575 - SGL_RS08085 0.89 +0.7 1,326,652 + +0.1 1,326,735 + +1.0 1,326,791 + -0.1 1,326,793 + -0.2 1,326,835 + -0.4 1,326,887 + -0.2 1,326,946 - SGL_RS08090 0.18 -0.1 1,326,979 + SGL_RS08090 0.27 -0.1 1,326,987 - SGL_RS08090 0.29 +0.1 1,327,017 + SGL_RS08090 0.37 +0.2
Or see this region's nucleotide sequence