Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07540 and SGL_RS07545 are separated by 29 nucleotides SGL_RS07545 and SGL_RS07550 are separated by 54 nucleotides
SGL_RS07540: SGL_RS07540 - endonuclease MutS2, at 1,217,156 to 1,219,624
_RS07540
SGL_RS07545: SGL_RS07545 - serine/threonine-protein phosphatase, at 1,219,654 to 1,220,418
_RS07545
SGL_RS07550: SGL_RS07550 - AarF/ABC1/UbiB kinase family protein, at 1,220,473 to 1,222,230
_RS07550
Position (kb)
1219
1220
1221 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1218.676 kb on + strand, within SGL_RS07540 at 1218.937 kb on - strand, within SGL_RS07540 at 1219.021 kb on + strand, within SGL_RS07540 at 1219.211 kb on + strand, within SGL_RS07540 at 1219.298 kb on + strand, within SGL_RS07540 at 1219.632 kb on - strand at 1219.634 kb on - strand at 1219.660 kb on + strand at 1219.671 kb on + strand at 1219.765 kb on + strand, within SGL_RS07545 at 1219.833 kb on + strand, within SGL_RS07545 at 1219.833 kb on + strand, within SGL_RS07545 at 1219.841 kb on - strand, within SGL_RS07545 at 1219.928 kb on + strand, within SGL_RS07545 at 1219.934 kb on + strand, within SGL_RS07545 at 1219.942 kb on - strand, within SGL_RS07545 at 1219.957 kb on - strand, within SGL_RS07545 at 1220.109 kb on - strand, within SGL_RS07545 at 1220.260 kb on + strand, within SGL_RS07545 at 1220.322 kb on - strand, within SGL_RS07545 at 1220.465 kb on - strand at 1220.595 kb on - strand at 1220.659 kb on - strand, within SGL_RS07550 at 1220.690 kb on - strand, within SGL_RS07550 at 1220.695 kb on - strand, within SGL_RS07550 at 1220.732 kb on - strand, within SGL_RS07550 at 1220.763 kb on - strand, within SGL_RS07550 at 1220.828 kb on - strand, within SGL_RS07550 at 1221.002 kb on - strand, within SGL_RS07550 at 1221.089 kb on - strand, within SGL_RS07550 at 1221.108 kb on - strand, within SGL_RS07550 at 1221.198 kb on + strand, within SGL_RS07550 at 1221.206 kb on - strand, within SGL_RS07550 at 1221.301 kb on + strand, within SGL_RS07550
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 1,218,676 + SGL_RS07540 0.62 -0.4 1,218,937 - SGL_RS07540 0.72 +0.5 1,219,021 + SGL_RS07540 0.76 +0.1 1,219,211 + SGL_RS07540 0.83 -0.2 1,219,298 + SGL_RS07540 0.87 +0.9 1,219,632 - +0.4 1,219,634 - -0.9 1,219,660 + -1.2 1,219,671 + -1.0 1,219,765 + SGL_RS07545 0.15 +0.3 1,219,833 + SGL_RS07545 0.23 -1.8 1,219,833 + SGL_RS07545 0.23 -1.2 1,219,841 - SGL_RS07545 0.24 -2.4 1,219,928 + SGL_RS07545 0.36 -1.2 1,219,934 + SGL_RS07545 0.37 -1.0 1,219,942 - SGL_RS07545 0.38 -0.6 1,219,957 - SGL_RS07545 0.40 -1.2 1,220,109 - SGL_RS07545 0.59 -0.7 1,220,260 + SGL_RS07545 0.79 -1.7 1,220,322 - SGL_RS07545 0.87 -0.2 1,220,465 - -2.4 1,220,595 - -0.9 1,220,659 - SGL_RS07550 0.11 -0.8 1,220,690 - SGL_RS07550 0.12 -0.6 1,220,695 - SGL_RS07550 0.13 -0.7 1,220,732 - SGL_RS07550 0.15 -0.4 1,220,763 - SGL_RS07550 0.16 -0.1 1,220,828 - SGL_RS07550 0.20 +0.4 1,221,002 - SGL_RS07550 0.30 -0.2 1,221,089 - SGL_RS07550 0.35 -3.8 1,221,108 - SGL_RS07550 0.36 -0.4 1,221,198 + SGL_RS07550 0.41 -0.3 1,221,206 - SGL_RS07550 0.42 +0.2 1,221,301 + SGL_RS07550 0.47 +0.3
Or see this region's nucleotide sequence