Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06780
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,047,840 | + | SGL_RS06770 | 0.62 | -0.6 | |
1,047,848 | - | SGL_RS06770 | 0.62 | +0.5 | |
1,047,895 | + | SGL_RS06770 | 0.66 | +0.1 | |
1,047,931 | + | SGL_RS06770 | 0.68 | +0.3 | |
1,048,109 | + | SGL_RS06770 | 0.82 | -0.4 | |
1,048,339 | - | -1.8 | |||
1,048,403 | + | -0.5 | |||
1,048,456 | - | SGL_RS06775 | 0.14 | -0.9 | |
1,048,564 | - | SGL_RS06775 | 0.45 | -1.4 | |
1,048,615 | + | SGL_RS06775 | 0.60 | -3.1 | |
1,048,854 | + | SGL_RS06780 | 0.39 | -1.7 | |
1,048,861 | + | SGL_RS06780 | 0.42 | -2.3 | |
1,048,862 | - | SGL_RS06780 | 0.42 | -1.2 | |
1,048,935 | + | SGL_RS06780 | 0.69 | -1.2 | |
1,049,024 | - | -1.2 | |||
1,049,026 | - | -1.6 | |||
1,049,212 | + | -0.1 | |||
1,049,641 | - | SGL_RS06785 | 0.14 | -0.4 | |
1,049,751 | + | SGL_RS06785 | 0.26 | -0.1 | |
1,049,763 | + | SGL_RS06785 | 0.28 | -0.3 | |
1,049,794 | + | SGL_RS06785 | 0.31 | -1.1 | |
1,049,794 | + | SGL_RS06785 | 0.31 | -0.0 | |
1,049,841 | + | SGL_RS06785 | 0.36 | -2.2 | |
1,049,864 | + | SGL_RS06785 | 0.39 | +0.3 | |
1,049,872 | - | SGL_RS06785 | 0.40 | -0.4 | |
1,049,945 | + | SGL_RS06785 | 0.48 | -1.0 | |
1,050,011 | - | SGL_RS06785 | 0.55 | -0.0 |
Or see this region's nucleotide sequence