Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06755
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,043,535 | - | SGL_RS06745 | 0.61 | +0.3 | |
1,043,631 | - | SGL_RS06745 | 0.72 | +0.1 | |
1,043,666 | - | SGL_RS06745 | 0.76 | -0.1 | |
1,043,666 | - | SGL_RS06745 | 0.76 | -0.5 | |
1,043,778 | + | SGL_RS06745 | 0.88 | -0.1 | |
1,043,808 | + | -0.2 | |||
1,043,870 | + | +0.6 | |||
1,043,883 | - | +0.3 | |||
1,043,883 | - | -0.1 | |||
1,043,984 | + | SGL_RS06750 | 0.13 | -0.7 | |
1,043,992 | - | SGL_RS06750 | 0.14 | -1.2 | |
1,044,029 | + | SGL_RS06750 | 0.21 | -1.5 | |
1,044,032 | - | SGL_RS06750 | 0.22 | -0.8 | |
1,044,091 | + | SGL_RS06750 | 0.33 | -0.2 | |
1,044,204 | + | SGL_RS06750 | 0.54 | -0.8 | |
1,044,306 | + | SGL_RS06750 | 0.73 | -1.0 | |
1,044,369 | - | SGL_RS06750 | 0.85 | -0.8 | |
1,044,486 | - | -0.3 | |||
1,044,559 | + | SGL_RS06755 | 0.24 | -1.3 | |
1,044,610 | - | SGL_RS06755 | 0.53 | -0.5 | |
1,044,623 | - | SGL_RS06755 | 0.60 | -1.9 | |
1,044,625 | + | SGL_RS06755 | 0.61 | -2.3 | |
1,044,634 | - | SGL_RS06755 | 0.66 | -2.4 | |
1,044,634 | - | SGL_RS06755 | 0.66 | -1.9 | |
1,044,859 | - | +0.4 | |||
1,045,313 | - | SGL_RS06760 | 0.27 | -0.3 | |
1,045,401 | + | SGL_RS06760 | 0.33 | -0.1 | |
1,045,620 | - | SGL_RS06760 | 0.49 | -1.7 |
Or see this region's nucleotide sequence