Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06675
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,025,590 | - | -0.2 | |||
1,025,616 | + | SGL_RS06670 | 0.10 | +0.7 | |
1,025,628 | - | SGL_RS06670 | 0.12 | -0.0 | |
1,025,703 | + | SGL_RS06670 | 0.20 | +0.7 | |
1,025,974 | + | SGL_RS06670 | 0.49 | -0.0 | |
1,026,038 | + | SGL_RS06670 | 0.56 | +0.1 | |
1,026,082 | + | SGL_RS06670 | 0.61 | +0.1 | |
1,026,114 | + | SGL_RS06670 | 0.64 | -0.5 | |
1,026,225 | - | SGL_RS06670 | 0.76 | +0.4 | |
1,026,263 | + | SGL_RS06670 | 0.81 | +0.9 | |
1,026,456 | - | +0.1 | |||
1,026,597 | + | -0.2 | |||
1,026,811 | - | SGL_RS06675 | 0.24 | -1.3 | |
1,026,817 | + | SGL_RS06675 | 0.25 | -1.6 | |
1,026,896 | + | SGL_RS06675 | 0.31 | -2.6 | |
1,027,087 | - | SGL_RS06675 | 0.47 | -2.2 | |
1,027,239 | + | SGL_RS06675 | 0.59 | -1.7 | |
1,027,304 | - | SGL_RS06675 | 0.65 | -2.3 | |
1,027,349 | + | SGL_RS06675 | 0.68 | -2.8 | |
1,027,511 | + | SGL_RS06675 | 0.81 | -0.4 | |
1,027,906 | + | -0.3 | |||
1,027,923 | + | +0.2 | |||
1,027,925 | + | -0.3 | |||
1,027,994 | + | SGL_RS06680 | 0.10 | +0.2 | |
1,028,021 | + | SGL_RS06680 | 0.12 | +0.0 | |
1,028,220 | - | SGL_RS06680 | 0.25 | +0.2 | |
1,028,489 | + | SGL_RS06680 | 0.43 | +0.1 | |
1,028,574 | - | SGL_RS06680 | 0.49 | -0.4 | |
1,028,590 | - | SGL_RS06680 | 0.50 | -0.5 | |
1,028,730 | - | SGL_RS06680 | 0.60 | -0.8 |
Or see this region's nucleotide sequence