Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06665
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
1,024,403 | + | SGL_RS06660 | 0.89 | -0.7 | |
1,024,411 | - | SGL_RS06660 | 0.90 | -0.8 | |
1,024,411 | - | SGL_RS06660 | 0.90 | -0.2 | |
1,024,524 | + | -1.4 | |||
1,024,559 | + | +0.4 | |||
1,024,624 | - | -0.3 | |||
1,024,626 | + | -0.4 | |||
1,024,626 | + | -1.1 | |||
1,024,634 | - | -1.0 | |||
1,024,671 | + | -0.7 | |||
1,024,793 | + | -0.1 | |||
1,024,866 | - | -0.5 | |||
1,024,879 | - | SGL_RS06665 | 0.10 | -0.5 | |
1,025,070 | + | SGL_RS06665 | 0.47 | -1.5 | |
1,025,070 | + | SGL_RS06665 | 0.47 | -3.9 | |
1,025,072 | + | SGL_RS06665 | 0.47 | -2.2 | |
1,025,075 | + | SGL_RS06665 | 0.48 | -1.4 | |
1,025,075 | + | SGL_RS06665 | 0.48 | -1.0 | |
1,025,078 | - | SGL_RS06665 | 0.48 | -1.4 | |
1,025,078 | - | SGL_RS06665 | 0.48 | -1.0 | |
1,025,276 | + | SGL_RS06665 | 0.86 | -0.5 | |
1,025,420 | + | +0.2 | |||
1,025,421 | - | -0.2 | |||
1,025,428 | - | +0.1 | |||
1,025,590 | - | -0.2 | |||
1,025,616 | + | SGL_RS06670 | 0.10 | +0.7 | |
1,025,628 | - | SGL_RS06670 | 0.12 | -0.0 | |
1,025,703 | + | SGL_RS06670 | 0.20 | +0.7 | |
1,025,974 | + | SGL_RS06670 | 0.49 | -0.0 | |
1,026,038 | + | SGL_RS06670 | 0.56 | +0.1 | |
1,026,082 | + | SGL_RS06670 | 0.61 | +0.1 | |
1,026,114 | + | SGL_RS06670 | 0.64 | -0.5 | |
1,026,225 | - | SGL_RS06670 | 0.76 | +0.4 | |
1,026,263 | + | SGL_RS06670 | 0.81 | +0.9 |
Or see this region's nucleotide sequence