Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05460 and SGL_RS05465 are separated by 39 nucleotides SGL_RS05465 and SGL_RS05470 are separated by 169 nucleotides SGL_RS05470 and SGL_RS05475 overlap by 4 nucleotides
SGL_RS05460: SGL_RS05460 - nicotinate-nucleotide adenylyltransferase, at 770,288 to 770,890
_RS05460
SGL_RS05465: SGL_RS05465 - hypothetical protein, at 770,930 to 771,481
_RS05465
SGL_RS05470: SGL_RS05470 - dihydropteroate synthase, at 771,651 to 772,520
_RS05470
SGL_RS05475: SGL_RS05475 - glycosyltransferase family 39 protein, at 772,517 to 773,905
_RS05475
Position (kb) 771
772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 771.248 kb on - strand, within SGL_RS05465 at 771.265 kb on - strand, within SGL_RS05465 at 771.332 kb on - strand, within SGL_RS05465 at 771.351 kb on + strand, within SGL_RS05465 at 771.351 kb on + strand, within SGL_RS05465 at 771.426 kb on - strand at 771.547 kb on - strand at 771.566 kb on + strand at 771.574 kb on - strand at 771.597 kb on + strand at 771.648 kb on + strand at 771.663 kb on + strand at 771.710 kb on - strand at 771.769 kb on + strand, within SGL_RS05470 at 771.769 kb on + strand, within SGL_RS05470 at 771.831 kb on + strand, within SGL_RS05470 at 772.008 kb on + strand, within SGL_RS05470 at 772.085 kb on + strand, within SGL_RS05470 at 772.202 kb on - strand, within SGL_RS05470 at 772.290 kb on + strand, within SGL_RS05470 at 772.300 kb on + strand, within SGL_RS05470 at 772.399 kb on + strand, within SGL_RS05470 at 772.482 kb on + strand at 772.490 kb on - strand at 772.495 kb on - strand at 772.580 kb on - strand at 772.633 kb on - strand at 772.658 kb on - strand, within SGL_RS05475 at 772.852 kb on + strand, within SGL_RS05475 at 772.934 kb on + strand, within SGL_RS05475 at 772.934 kb on - strand, within SGL_RS05475 at 772.971 kb on + strand, within SGL_RS05475 at 773.206 kb on - strand, within SGL_RS05475 at 773.315 kb on + strand, within SGL_RS05475 at 773.368 kb on - strand, within SGL_RS05475 at 773.416 kb on + strand, within SGL_RS05475 at 773.429 kb on + strand, within SGL_RS05475 at 773.429 kb on + strand, within SGL_RS05475 at 773.439 kb on + strand, within SGL_RS05475 at 773.439 kb on - strand, within SGL_RS05475 at 773.471 kb on - strand, within SGL_RS05475 at 773.498 kb on + strand, within SGL_RS05475
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 771,248 - SGL_RS05465 0.58 -2.2 771,265 - SGL_RS05465 0.61 -0.9 771,332 - SGL_RS05465 0.73 -1.4 771,351 + SGL_RS05465 0.76 -2.0 771,351 + SGL_RS05465 0.76 -3.4 771,426 - -0.6 771,547 - -0.3 771,566 + -0.2 771,574 - -0.6 771,597 + -0.1 771,648 + -1.0 771,663 + +0.1 771,710 - -2.1 771,769 + SGL_RS05470 0.14 -3.4 771,769 + SGL_RS05470 0.14 -1.2 771,831 + SGL_RS05470 0.21 -1.8 772,008 + SGL_RS05470 0.41 -1.9 772,085 + SGL_RS05470 0.50 +1.3 772,202 - SGL_RS05470 0.63 -1.1 772,290 + SGL_RS05470 0.73 -1.7 772,300 + SGL_RS05470 0.75 -2.5 772,399 + SGL_RS05470 0.86 -2.1 772,482 + -3.3 772,490 - -0.3 772,495 - -2.3 772,580 - +1.4 772,633 - -0.1 772,658 - SGL_RS05475 0.10 -0.1 772,852 + SGL_RS05475 0.24 +0.3 772,934 + SGL_RS05475 0.30 +0.5 772,934 - SGL_RS05475 0.30 -0.2 772,971 + SGL_RS05475 0.33 +0.3 773,206 - SGL_RS05475 0.50 +0.2 773,315 + SGL_RS05475 0.57 -0.0 773,368 - SGL_RS05475 0.61 +0.2 773,416 + SGL_RS05475 0.65 -0.0 773,429 + SGL_RS05475 0.66 +0.1 773,429 + SGL_RS05475 0.66 +0.6 773,439 + SGL_RS05475 0.66 +0.2 773,439 - SGL_RS05475 0.66 -0.1 773,471 - SGL_RS05475 0.69 +0.1 773,498 + SGL_RS05475 0.71 -0.1
Or see this region's nucleotide sequence