Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05430 and SGL_RS05435 are separated by 228 nucleotides SGL_RS05435 and SGL_RS05440 are separated by 188 nucleotides
SGL_RS05430: SGL_RS05430 - hypothetical protein, at 763,317 to 764,072
_RS05430
SGL_RS05435: SGL_RS05435 - heavy metal translocating P-type ATPase, at 764,301 to 766,538
_RS05435
SGL_RS05440: SGL_RS05440 - ACP S-malonyltransferase, at 766,727 to 767,608
_RS05440
Position (kb) 764
765
766
767 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 763.301 kb on + strand at 763.305 kb on + strand at 763.309 kb on - strand at 763.352 kb on - strand at 763.516 kb on + strand, within SGL_RS05430 at 763.524 kb on - strand, within SGL_RS05430 at 763.563 kb on + strand, within SGL_RS05430 at 763.563 kb on + strand, within SGL_RS05430 at 763.571 kb on - strand, within SGL_RS05430 at 763.744 kb on + strand, within SGL_RS05430 at 763.744 kb on + strand, within SGL_RS05430 at 763.844 kb on + strand, within SGL_RS05430 at 763.846 kb on + strand, within SGL_RS05430 at 763.931 kb on - strand, within SGL_RS05430 at 763.940 kb on - strand, within SGL_RS05430 at 763.967 kb on - strand, within SGL_RS05430 at 763.980 kb on + strand, within SGL_RS05430 at 764.056 kb on - strand at 764.593 kb on + strand, within SGL_RS05435 at 764.601 kb on - strand, within SGL_RS05435 at 764.787 kb on - strand, within SGL_RS05435 at 765.020 kb on - strand, within SGL_RS05435 at 765.143 kb on + strand, within SGL_RS05435 at 765.178 kb on - strand, within SGL_RS05435 at 765.211 kb on - strand, within SGL_RS05435 at 765.258 kb on - strand, within SGL_RS05435 at 765.312 kb on - strand, within SGL_RS05435 at 765.490 kb on - strand, within SGL_RS05435 at 765.718 kb on + strand, within SGL_RS05435 at 766.018 kb on - strand, within SGL_RS05435 at 766.364 kb on - strand at 766.490 kb on + strand at 766.538 kb on + strand at 766.558 kb on + strand at 766.889 kb on - strand, within SGL_RS05440 at 767.218 kb on - strand, within SGL_RS05440 at 767.220 kb on - strand, within SGL_RS05440 at 767.223 kb on - strand, within SGL_RS05440 at 767.242 kb on + strand, within SGL_RS05440 at 767.320 kb on - strand, within SGL_RS05440
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 763,301 + -0.3 763,305 + +0.0 763,309 - +0.2 763,352 - -0.5 763,516 + SGL_RS05430 0.26 -0.3 763,524 - SGL_RS05430 0.27 +0.4 763,563 + SGL_RS05430 0.33 -0.3 763,563 + SGL_RS05430 0.33 +0.3 763,571 - SGL_RS05430 0.34 +0.1 763,744 + SGL_RS05430 0.56 -0.5 763,744 + SGL_RS05430 0.56 -0.4 763,844 + SGL_RS05430 0.70 +0.3 763,846 + SGL_RS05430 0.70 +0.2 763,931 - SGL_RS05430 0.81 -0.0 763,940 - SGL_RS05430 0.82 +0.0 763,967 - SGL_RS05430 0.86 -0.1 763,980 + SGL_RS05430 0.88 +0.2 764,056 - -0.0 764,593 + SGL_RS05435 0.13 -2.9 764,601 - SGL_RS05435 0.13 -2.9 764,787 - SGL_RS05435 0.22 -4.3 765,020 - SGL_RS05435 0.32 -2.3 765,143 + SGL_RS05435 0.38 -2.5 765,178 - SGL_RS05435 0.39 -3.1 765,211 - SGL_RS05435 0.41 -2.3 765,258 - SGL_RS05435 0.43 -1.5 765,312 - SGL_RS05435 0.45 -2.5 765,490 - SGL_RS05435 0.53 -3.9 765,718 + SGL_RS05435 0.63 -3.4 766,018 - SGL_RS05435 0.77 -3.9 766,364 - -4.5 766,490 + -2.3 766,538 + -1.5 766,558 + -4.4 766,889 - SGL_RS05440 0.18 -0.3 767,218 - SGL_RS05440 0.56 -2.9 767,220 - SGL_RS05440 0.56 -1.9 767,223 - SGL_RS05440 0.56 -1.5 767,242 + SGL_RS05440 0.58 +0.1 767,320 - SGL_RS05440 0.67 -2.9
Or see this region's nucleotide sequence