Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05125 and SGL_RS05130 are separated by 323 nucleotides SGL_RS05130 and SGL_RS05135 are separated by 64 nucleotides SGL_RS05135 and SGL_RS05140 are separated by 122 nucleotides SGL_RS05140 and SGL_RS05145 are separated by 24 nucleotides
SGL_RS05125: SGL_RS05125 - ferrous iron transport protein B, at 698,970 to 700,814
_RS05125
SGL_RS05130: SGL_RS05130 - chlorophyll a/b-binding protein, at 701,138 to 701,350
_RS05130
SGL_RS05135: SGL_RS05135 - GAF domain-containing protein, at 701,415 to 704,267
_RS05135
SGL_RS05140: SGL_RS05140 - divergent PAP2 family protein, at 704,390 to 704,845
_RS05140
SGL_RS05145: SGL_RS05145 - hypothetical protein, at 704,870 to 705,064
_RS05145
Position (kb) 701
702
703
704
705 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 701.155 kb on - strand at 701.597 kb on - strand at 701.659 kb on - strand at 701.659 kb on - strand at 701.692 kb on - strand at 701.705 kb on + strand, within SGL_RS05135 at 701.715 kb on + strand, within SGL_RS05135 at 701.723 kb on - strand, within SGL_RS05135 at 701.723 kb on - strand, within SGL_RS05135 at 701.778 kb on - strand, within SGL_RS05135 at 701.842 kb on + strand, within SGL_RS05135 at 701.875 kb on - strand, within SGL_RS05135 at 701.875 kb on - strand, within SGL_RS05135 at 701.875 kb on - strand, within SGL_RS05135 at 701.882 kb on - strand, within SGL_RS05135 at 702.003 kb on + strand, within SGL_RS05135 at 702.208 kb on + strand, within SGL_RS05135 at 702.333 kb on + strand, within SGL_RS05135 at 702.359 kb on + strand, within SGL_RS05135 at 702.373 kb on - strand, within SGL_RS05135 at 702.428 kb on + strand, within SGL_RS05135 at 702.428 kb on + strand, within SGL_RS05135 at 702.428 kb on + strand, within SGL_RS05135 at 702.488 kb on + strand, within SGL_RS05135 at 702.633 kb on - strand, within SGL_RS05135 at 702.710 kb on - strand, within SGL_RS05135 at 702.712 kb on + strand, within SGL_RS05135 at 702.712 kb on + strand, within SGL_RS05135 at 702.720 kb on - strand, within SGL_RS05135 at 702.720 kb on - strand, within SGL_RS05135 at 702.891 kb on - strand, within SGL_RS05135 at 702.962 kb on + strand, within SGL_RS05135 at 703.003 kb on - strand, within SGL_RS05135 at 703.003 kb on - strand, within SGL_RS05135 at 703.098 kb on - strand, within SGL_RS05135 at 703.126 kb on + strand, within SGL_RS05135 at 703.126 kb on + strand, within SGL_RS05135 at 703.136 kb on + strand, within SGL_RS05135 at 703.144 kb on - strand, within SGL_RS05135 at 703.281 kb on - strand, within SGL_RS05135 at 703.328 kb on + strand, within SGL_RS05135 at 703.602 kb on + strand, within SGL_RS05135 at 703.705 kb on - strand, within SGL_RS05135 at 703.833 kb on + strand, within SGL_RS05135 at 703.940 kb on + strand, within SGL_RS05135 at 703.968 kb on + strand, within SGL_RS05135 at 704.092 kb on - strand at 704.104 kb on + strand at 704.104 kb on + strand at 704.124 kb on + strand at 704.201 kb on + strand at 704.209 kb on - strand at 704.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 701,155 - -0.2 701,597 - -2.2 701,659 - -1.1 701,659 - -1.0 701,692 - -1.3 701,705 + SGL_RS05135 0.10 -2.4 701,715 + SGL_RS05135 0.11 -1.4 701,723 - SGL_RS05135 0.11 -0.9 701,723 - SGL_RS05135 0.11 -1.1 701,778 - SGL_RS05135 0.13 -1.8 701,842 + SGL_RS05135 0.15 -1.7 701,875 - SGL_RS05135 0.16 -2.2 701,875 - SGL_RS05135 0.16 -0.9 701,875 - SGL_RS05135 0.16 -1.5 701,882 - SGL_RS05135 0.16 -1.7 702,003 + SGL_RS05135 0.21 -1.2 702,208 + SGL_RS05135 0.28 -2.3 702,333 + SGL_RS05135 0.32 -1.2 702,359 + SGL_RS05135 0.33 -2.6 702,373 - SGL_RS05135 0.34 -1.4 702,428 + SGL_RS05135 0.36 -1.6 702,428 + SGL_RS05135 0.36 -1.5 702,428 + SGL_RS05135 0.36 -1.6 702,488 + SGL_RS05135 0.38 -1.4 702,633 - SGL_RS05135 0.43 -2.0 702,710 - SGL_RS05135 0.45 -1.3 702,712 + SGL_RS05135 0.45 -1.7 702,712 + SGL_RS05135 0.45 -1.2 702,720 - SGL_RS05135 0.46 -1.3 702,720 - SGL_RS05135 0.46 -1.4 702,891 - SGL_RS05135 0.52 -2.5 702,962 + SGL_RS05135 0.54 -1.8 703,003 - SGL_RS05135 0.56 -1.2 703,003 - SGL_RS05135 0.56 -1.6 703,098 - SGL_RS05135 0.59 -1.5 703,126 + SGL_RS05135 0.60 -2.0 703,126 + SGL_RS05135 0.60 -1.9 703,136 + SGL_RS05135 0.60 -1.7 703,144 - SGL_RS05135 0.61 -1.7 703,281 - SGL_RS05135 0.65 -3.5 703,328 + SGL_RS05135 0.67 +0.6 703,602 + SGL_RS05135 0.77 -1.0 703,705 - SGL_RS05135 0.80 -1.5 703,833 + SGL_RS05135 0.85 -0.8 703,940 + SGL_RS05135 0.89 +0.4 703,968 + SGL_RS05135 0.89 -0.2 704,092 - -0.6 704,104 + -0.2 704,104 + -0.0 704,124 + +0.3 704,201 + -0.6 704,209 - -1.2 704,868 - -0.1
Or see this region's nucleotide sequence