Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02840 and SGL_RS02845 are separated by 99 nucleotides SGL_RS02845 and SGL_RS02850 are separated by 69 nucleotides SGL_RS02850 and SGL_RS02855 are separated by 234 nucleotides
SGL_RS02840: SGL_RS02840 - MBL fold metallo-hydrolase, at 208,549 to 209,427
_RS02840
SGL_RS02845: SGL_RS02845 - thylakoid membrane protein, at 209,527 to 209,826
_RS02845
SGL_RS02850: SGL_RS02850 - uracil phosphoribosyltransferase, at 209,896 to 210,546
_RS02850
SGL_RS02855: SGL_RS02855 - SPFH domain-containing protein, at 210,781 to 211,629
_RS02855
Position (kb) 209
210
211 Strain fitness (log2 ratio) -2
-1
0
1 at 209.094 kb on - strand, within SGL_RS02840 at 209.134 kb on + strand, within SGL_RS02840 at 209.144 kb on + strand, within SGL_RS02840 at 209.337 kb on + strand, within SGL_RS02840 at 209.362 kb on - strand at 209.366 kb on + strand at 209.378 kb on + strand at 209.477 kb on - strand at 209.494 kb on - strand at 209.517 kb on - strand at 209.573 kb on + strand, within SGL_RS02845 at 209.727 kb on - strand, within SGL_RS02845 at 209.924 kb on + strand at 209.933 kb on - strand at 209.950 kb on - strand at 209.950 kb on - strand at 210.066 kb on - strand, within SGL_RS02850 at 210.102 kb on - strand, within SGL_RS02850 at 210.270 kb on - strand, within SGL_RS02850 at 210.341 kb on - strand, within SGL_RS02850 at 210.415 kb on - strand, within SGL_RS02850 at 210.703 kb on - strand at 210.884 kb on - strand, within SGL_RS02855 at 210.907 kb on + strand, within SGL_RS02855 at 210.917 kb on - strand, within SGL_RS02855 at 210.917 kb on - strand, within SGL_RS02855 at 210.919 kb on + strand, within SGL_RS02855 at 211.214 kb on - strand, within SGL_RS02855 at 211.377 kb on - strand, within SGL_RS02855 at 211.381 kb on + strand, within SGL_RS02855 at 211.381 kb on + strand, within SGL_RS02855 at 211.381 kb on + strand, within SGL_RS02855 at 211.408 kb on - strand, within SGL_RS02855 at 211.480 kb on + strand, within SGL_RS02855 at 211.488 kb on - strand, within SGL_RS02855
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 209,094 - SGL_RS02840 0.62 -0.3 209,134 + SGL_RS02840 0.67 -1.0 209,144 + SGL_RS02840 0.68 +0.7 209,337 + SGL_RS02840 0.90 -0.6 209,362 - -0.4 209,366 + -1.0 209,378 + -0.9 209,477 - +0.8 209,494 - -0.5 209,517 - +0.2 209,573 + SGL_RS02845 0.15 -0.6 209,727 - SGL_RS02845 0.67 -0.2 209,924 + -2.0 209,933 - -0.4 209,950 - -0.8 209,950 - -0.8 210,066 - SGL_RS02850 0.26 -0.9 210,102 - SGL_RS02850 0.32 -1.0 210,270 - SGL_RS02850 0.57 -1.4 210,341 - SGL_RS02850 0.68 -0.7 210,415 - SGL_RS02850 0.80 -1.4 210,703 - +0.4 210,884 - SGL_RS02855 0.12 -0.1 210,907 + SGL_RS02855 0.15 -0.0 210,917 - SGL_RS02855 0.16 -0.2 210,917 - SGL_RS02855 0.16 +0.1 210,919 + SGL_RS02855 0.16 +0.4 211,214 - SGL_RS02855 0.51 -0.3 211,377 - SGL_RS02855 0.70 -0.1 211,381 + SGL_RS02855 0.71 +0.2 211,381 + SGL_RS02855 0.71 -0.5 211,381 + SGL_RS02855 0.71 -0.1 211,408 - SGL_RS02855 0.74 -0.3 211,480 + SGL_RS02855 0.82 +0.3 211,488 - SGL_RS02855 0.83 -1.2
Or see this region's nucleotide sequence