Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02735 and SGL_RS02740 are separated by 43 nucleotides SGL_RS02740 and SGL_RS02745 are separated by 135 nucleotides SGL_RS02745 and SGL_RS02750 are separated by 46 nucleotides
SGL_RS02735: SGL_RS02735 - DMT family transporter, at 183,935 to 184,924
_RS02735
SGL_RS02740: SGL_RS02740 - HAS-barrel domain-containing protein, at 184,968 to 185,636
_RS02740
SGL_RS02745: SGL_RS02745 - ABC transporter ATP-binding protein, at 185,772 to 186,554
_RS02745
SGL_RS02750: SGL_RS02750 - mechanosensitive ion channel family protein, at 186,601 to 188,892
_RS02750
Position (kb) 184
185
186 Strain fitness (log2 ratio) -2
-1
0
1 at 184.258 kb on + strand, within SGL_RS02735 at 184.286 kb on + strand, within SGL_RS02735 at 184.338 kb on - strand, within SGL_RS02735 at 184.355 kb on + strand, within SGL_RS02735 at 184.542 kb on + strand, within SGL_RS02735 at 184.771 kb on + strand, within SGL_RS02735 at 184.988 kb on + strand at 185.047 kb on + strand, within SGL_RS02740 at 185.048 kb on + strand, within SGL_RS02740 at 185.117 kb on + strand, within SGL_RS02740 at 185.296 kb on - strand, within SGL_RS02740 at 185.387 kb on + strand, within SGL_RS02740 at 185.474 kb on - strand, within SGL_RS02740 at 186.019 kb on - strand, within SGL_RS02745 at 186.019 kb on - strand, within SGL_RS02745 at 186.076 kb on - strand, within SGL_RS02745 at 186.093 kb on + strand, within SGL_RS02745 at 186.100 kb on - strand, within SGL_RS02745 at 186.233 kb on + strand, within SGL_RS02745 at 186.265 kb on + strand, within SGL_RS02745 at 186.381 kb on + strand, within SGL_RS02745 at 186.389 kb on - strand, within SGL_RS02745 at 186.470 kb on + strand, within SGL_RS02745 at 186.512 kb on - strand at 186.524 kb on + strand at 186.539 kb on + strand at 186.604 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 184,258 + SGL_RS02735 0.33 -0.4 184,286 + SGL_RS02735 0.35 +0.2 184,338 - SGL_RS02735 0.41 +0.2 184,355 + SGL_RS02735 0.42 +0.2 184,542 + SGL_RS02735 0.61 +0.4 184,771 + SGL_RS02735 0.84 -0.1 184,988 + -1.5 185,047 + SGL_RS02740 0.12 -1.8 185,048 + SGL_RS02740 0.12 -1.6 185,117 + SGL_RS02740 0.22 -1.4 185,296 - SGL_RS02740 0.49 -1.6 185,387 + SGL_RS02740 0.63 -1.1 185,474 - SGL_RS02740 0.76 -1.8 186,019 - SGL_RS02745 0.32 -0.2 186,019 - SGL_RS02745 0.32 -0.0 186,076 - SGL_RS02745 0.39 +0.1 186,093 + SGL_RS02745 0.41 -0.3 186,100 - SGL_RS02745 0.42 -0.3 186,233 + SGL_RS02745 0.59 +0.3 186,265 + SGL_RS02745 0.63 +0.0 186,381 + SGL_RS02745 0.78 -0.2 186,389 - SGL_RS02745 0.79 -0.3 186,470 + SGL_RS02745 0.89 -0.4 186,512 - +0.4 186,524 + -0.2 186,539 + +0.2 186,604 + -0.3
Or see this region's nucleotide sequence