Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02250 and SGL_RS02255 are separated by 117 nucleotides SGL_RS02255 and SGL_RS02260 are separated by 106 nucleotides SGL_RS02260 and SGL_RS02265 are separated by 156 nucleotides
SGL_RS02250: SGL_RS02250 - glycosyltransferase, at 86,159 to 87,418
_RS02250
SGL_RS02255: SGL_RS02255 - sulfite exporter TauE/SafE family protein, at 87,536 to 87,910
_RS02255
SGL_RS02260: SGL_RS02260 - HEAT repeat domain-containing protein, at 88,017 to 88,661
_RS02260
SGL_RS02265: SGL_RS02265 - transglutaminase family protein, at 88,818 to 90,506
_RS02265
Position (kb) 88
89 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 87.102 kb on + strand, within SGL_RS02250 at 87.110 kb on - strand, within SGL_RS02250 at 87.138 kb on - strand, within SGL_RS02250 at 87.138 kb on - strand, within SGL_RS02250 at 87.710 kb on + strand, within SGL_RS02255 at 87.718 kb on - strand, within SGL_RS02255 at 87.754 kb on + strand, within SGL_RS02255 at 87.762 kb on - strand, within SGL_RS02255 at 87.775 kb on - strand, within SGL_RS02255 at 87.823 kb on - strand, within SGL_RS02255 at 87.996 kb on + strand at 87.996 kb on + strand at 88.004 kb on - strand at 88.015 kb on + strand at 88.032 kb on + strand at 88.042 kb on + strand at 88.128 kb on - strand, within SGL_RS02260 at 88.390 kb on + strand, within SGL_RS02260 at 88.398 kb on - strand, within SGL_RS02260 at 88.509 kb on + strand, within SGL_RS02260 at 88.648 kb on + strand at 88.656 kb on - strand at 88.671 kb on + strand at 88.679 kb on - strand at 88.681 kb on + strand at 88.683 kb on + strand at 88.717 kb on + strand at 88.717 kb on + strand at 88.747 kb on - strand at 88.784 kb on - strand at 88.784 kb on - strand at 88.795 kb on + strand at 89.028 kb on - strand, within SGL_RS02265 at 89.098 kb on + strand, within SGL_RS02265 at 89.100 kb on + strand, within SGL_RS02265 at 89.129 kb on + strand, within SGL_RS02265 at 89.130 kb on + strand, within SGL_RS02265 at 89.143 kb on + strand, within SGL_RS02265 at 89.212 kb on - strand, within SGL_RS02265 at 89.304 kb on + strand, within SGL_RS02265 at 89.559 kb on - strand, within SGL_RS02265 at 89.559 kb on - strand, within SGL_RS02265 at 89.575 kb on + strand, within SGL_RS02265 at 89.592 kb on - strand, within SGL_RS02265
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol 2 vol% remove 87,102 + SGL_RS02250 0.75 +0.2 87,110 - SGL_RS02250 0.75 +0.3 87,138 - SGL_RS02250 0.78 +0.0 87,138 - SGL_RS02250 0.78 +0.1 87,710 + SGL_RS02255 0.46 +0.3 87,718 - SGL_RS02255 0.49 -0.2 87,754 + SGL_RS02255 0.58 +0.1 87,762 - SGL_RS02255 0.60 +0.5 87,775 - SGL_RS02255 0.64 -0.2 87,823 - SGL_RS02255 0.77 -0.3 87,996 + +0.1 87,996 + +0.2 88,004 - -0.3 88,015 + +0.3 88,032 + -0.4 88,042 + -0.6 88,128 - SGL_RS02260 0.17 -1.6 88,390 + SGL_RS02260 0.58 -3.1 88,398 - SGL_RS02260 0.59 -1.8 88,509 + SGL_RS02260 0.76 -3.3 88,648 + -1.1 88,656 - -0.1 88,671 + -0.0 88,679 - -0.4 88,681 + -0.4 88,683 + -0.2 88,717 + +0.2 88,717 + +0.1 88,747 - +0.2 88,784 - +0.1 88,784 - +0.2 88,795 + +0.0 89,028 - SGL_RS02265 0.12 -1.0 89,098 + SGL_RS02265 0.17 -0.2 89,100 + SGL_RS02265 0.17 +0.1 89,129 + SGL_RS02265 0.18 -0.5 89,130 + SGL_RS02265 0.18 -1.2 89,143 + SGL_RS02265 0.19 -0.1 89,212 - SGL_RS02265 0.23 -0.4 89,304 + SGL_RS02265 0.29 +0.5 89,559 - SGL_RS02265 0.44 -0.1 89,559 - SGL_RS02265 0.44 -1.6 89,575 + SGL_RS02265 0.45 -0.3 89,592 - SGL_RS02265 0.46 +0.2
Or see this region's nucleotide sequence