Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS00270
Experiment: Ethanol 2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ethanol 2 vol% |
---|---|---|---|---|---|
remove | |||||
59,921 | - | SGL_RS00265 | 0.83 | +1.9 | |
60,047 | + | SGL_RS00265 | 0.88 | +2.1 | |
60,081 | + | SGL_RS00265 | 0.90 | +1.5 | |
60,099 | + | +1.9 | |||
60,116 | + | +1.7 | |||
60,238 | + | +2.1 | |||
60,246 | - | +2.1 | |||
60,303 | - | +1.7 | |||
60,303 | - | +1.5 | |||
60,303 | - | +1.5 | |||
60,303 | - | +1.3 | |||
60,326 | + | +2.2 | |||
60,339 | - | +1.3 | |||
60,349 | - | +1.7 | |||
60,398 | + | SGL_RS00270 | 0.12 | +1.9 | |
60,456 | - | SGL_RS00270 | 0.18 | +1.8 | |
60,592 | + | SGL_RS00270 | 0.33 | +1.8 | |
60,611 | + | SGL_RS00270 | 0.35 | +1.7 | |
60,747 | - | SGL_RS00270 | 0.50 | +1.6 | |
61,377 | - | +1.0 | |||
61,385 | - | -0.1 | |||
61,400 | + | +1.1 | |||
61,843 | + | SGL_RS00275 | 0.18 | +1.0 | |
61,907 | - | SGL_RS00275 | 0.19 | +1.1 | |
61,978 | - | SGL_RS00275 | 0.21 | +0.6 | |
61,984 | + | SGL_RS00275 | 0.22 | +0.8 | |
62,027 | - | SGL_RS00275 | 0.23 | -1.5 | |
62,142 | + | SGL_RS00275 | 0.26 | +0.9 | |
62,142 | + | SGL_RS00275 | 0.26 | +0.8 | |
62,167 | + | SGL_RS00275 | 0.27 | +1.8 | |
62,174 | - | SGL_RS00275 | 0.27 | +1.0 |
Or see this region's nucleotide sequence