Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17630 and SGL_RS17635 are separated by 137 nucleotides SGL_RS17635 and SGL_RS17640 overlap by 4 nucleotides
SGL_RS17630: SGL_RS17630 - glucosylglycerol 3-phosphatase, at 3,409,355 to 3,410,623
_RS17630
SGL_RS17635: SGL_RS17635 - ABC transporter ATP-binding protein, at 3,410,761 to 3,411,852
_RS17635
SGL_RS17640: SGL_RS17640 - family 10 glycosylhydrolase, at 3,411,849 to 3,413,075
_RS17640
Position (kb)
3410
3411
3412 Strain fitness (log2 ratio)
-2
-1
0
1 at 3409.846 kb on - strand, within SGL_RS17630 at 3410.064 kb on - strand, within SGL_RS17630 at 3410.077 kb on - strand, within SGL_RS17630 at 3410.155 kb on + strand, within SGL_RS17630 at 3410.165 kb on + strand, within SGL_RS17630 at 3410.169 kb on + strand, within SGL_RS17630 at 3410.266 kb on - strand, within SGL_RS17630 at 3410.317 kb on - strand, within SGL_RS17630 at 3410.411 kb on + strand, within SGL_RS17630 at 3410.497 kb on + strand at 3410.507 kb on + strand at 3410.512 kb on + strand at 3410.556 kb on + strand at 3410.698 kb on + strand at 3410.980 kb on + strand, within SGL_RS17635 at 3411.008 kb on + strand, within SGL_RS17635 at 3411.118 kb on - strand, within SGL_RS17635 at 3411.187 kb on + strand, within SGL_RS17635 at 3411.207 kb on - strand, within SGL_RS17635 at 3411.295 kb on + strand, within SGL_RS17635 at 3411.295 kb on + strand, within SGL_RS17635 at 3411.339 kb on - strand, within SGL_RS17635 at 3411.408 kb on - strand, within SGL_RS17635 at 3411.410 kb on - strand, within SGL_RS17635 at 3411.536 kb on + strand, within SGL_RS17635 at 3411.560 kb on + strand, within SGL_RS17635 at 3411.766 kb on - strand at 3412.188 kb on - strand, within SGL_RS17640 at 3412.463 kb on - strand, within SGL_RS17640 at 3412.653 kb on - strand, within SGL_RS17640 at 3412.817 kb on - strand, within SGL_RS17640
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 3,409,846 - SGL_RS17630 0.39 -1.7 3,410,064 - SGL_RS17630 0.56 -2.0 3,410,077 - SGL_RS17630 0.57 -1.8 3,410,155 + SGL_RS17630 0.63 -1.5 3,410,165 + SGL_RS17630 0.64 -2.1 3,410,169 + SGL_RS17630 0.64 -2.0 3,410,266 - SGL_RS17630 0.72 -1.8 3,410,317 - SGL_RS17630 0.76 -2.0 3,410,411 + SGL_RS17630 0.83 -2.4 3,410,497 + -2.6 3,410,507 + -1.6 3,410,512 + -2.1 3,410,556 + -2.4 3,410,698 + +0.3 3,410,980 + SGL_RS17635 0.20 -0.9 3,411,008 + SGL_RS17635 0.23 -1.2 3,411,118 - SGL_RS17635 0.33 -0.7 3,411,187 + SGL_RS17635 0.39 -0.6 3,411,207 - SGL_RS17635 0.41 -0.8 3,411,295 + SGL_RS17635 0.49 -0.8 3,411,295 + SGL_RS17635 0.49 -1.4 3,411,339 - SGL_RS17635 0.53 -1.6 3,411,408 - SGL_RS17635 0.59 +0.2 3,411,410 - SGL_RS17635 0.59 -1.5 3,411,536 + SGL_RS17635 0.71 -0.6 3,411,560 + SGL_RS17635 0.73 -1.6 3,411,766 - -1.3 3,412,188 - SGL_RS17640 0.28 +0.0 3,412,463 - SGL_RS17640 0.50 -0.2 3,412,653 - SGL_RS17640 0.66 +0.4 3,412,817 - SGL_RS17640 0.79 -0.5
Or see this region's nucleotide sequence