Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15915 and SGL_RS15920 are separated by 71 nucleotides SGL_RS15920 and SGL_RS15925 are separated by 123 nucleotides SGL_RS15925 and SGL_RS15930 are separated by 236 nucleotides
SGL_RS15915: SGL_RS15915 - bifunctional metallophosphatase/5'-nucleotidase, at 3,020,301 to 3,021,821
_RS15915
SGL_RS15920: SGL_RS15920 - GNAT family N-acetyltransferase, at 3,021,893 to 3,022,408
_RS15920
SGL_RS15925: SGL_RS15925 - ATP-binding protein, at 3,022,532 to 3,024,271
_RS15925
SGL_RS15930: SGL_RS15930 - hypothetical protein, at 3,024,508 to 3,025,746
_RS15930
Position (kb)
3022
3023
3024
3025 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 3021.620 kb on + strand, within SGL_RS15915 at 3021.625 kb on + strand, within SGL_RS15915 at 3021.633 kb on - strand, within SGL_RS15915 at 3021.925 kb on + strand at 3021.925 kb on + strand at 3021.933 kb on - strand at 3021.970 kb on + strand, within SGL_RS15920 at 3021.971 kb on + strand, within SGL_RS15920 at 3022.045 kb on - strand, within SGL_RS15920 at 3022.045 kb on - strand, within SGL_RS15920 at 3022.049 kb on + strand, within SGL_RS15920 at 3022.049 kb on + strand, within SGL_RS15920 at 3022.069 kb on + strand, within SGL_RS15920 at 3022.069 kb on + strand, within SGL_RS15920 at 3022.069 kb on - strand, within SGL_RS15920 at 3022.103 kb on + strand, within SGL_RS15920 at 3022.141 kb on + strand, within SGL_RS15920 at 3022.196 kb on + strand, within SGL_RS15920 at 3022.251 kb on - strand, within SGL_RS15920 at 3022.274 kb on + strand, within SGL_RS15920 at 3022.281 kb on - strand, within SGL_RS15920 at 3022.352 kb on + strand, within SGL_RS15920 at 3022.454 kb on + strand at 3022.526 kb on - strand at 3022.568 kb on + strand at 3022.576 kb on - strand at 3022.646 kb on + strand at 3022.662 kb on + strand at 3022.672 kb on + strand at 3022.677 kb on - strand at 3022.679 kb on + strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.687 kb on - strand at 3022.715 kb on + strand, within SGL_RS15925 at 3022.723 kb on - strand, within SGL_RS15925 at 3022.847 kb on - strand, within SGL_RS15925 at 3022.962 kb on - strand, within SGL_RS15925 at 3023.049 kb on - strand, within SGL_RS15925 at 3023.064 kb on - strand, within SGL_RS15925 at 3023.345 kb on + strand, within SGL_RS15925 at 3023.517 kb on + strand, within SGL_RS15925 at 3023.518 kb on - strand, within SGL_RS15925 at 3023.561 kb on + strand, within SGL_RS15925 at 3023.676 kb on + strand, within SGL_RS15925 at 3023.729 kb on + strand, within SGL_RS15925 at 3023.847 kb on - strand, within SGL_RS15925 at 3023.879 kb on - strand, within SGL_RS15925 at 3023.907 kb on + strand, within SGL_RS15925 at 3024.066 kb on + strand, within SGL_RS15925 at 3024.144 kb on + strand at 3024.144 kb on + strand at 3024.228 kb on - strand at 3024.241 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 3,021,620 + SGL_RS15915 0.87 -0.3 3,021,625 + SGL_RS15915 0.87 +1.9 3,021,633 - SGL_RS15915 0.88 +0.4 3,021,925 + -2.4 3,021,925 + -2.9 3,021,933 - +0.0 3,021,970 + SGL_RS15920 0.15 -2.6 3,021,971 + SGL_RS15920 0.15 -2.8 3,022,045 - SGL_RS15920 0.29 -3.9 3,022,045 - SGL_RS15920 0.29 -2.9 3,022,049 + SGL_RS15920 0.30 -2.3 3,022,049 + SGL_RS15920 0.30 -1.8 3,022,069 + SGL_RS15920 0.34 -3.8 3,022,069 + SGL_RS15920 0.34 -3.3 3,022,069 - SGL_RS15920 0.34 +0.8 3,022,103 + SGL_RS15920 0.41 -2.5 3,022,141 + SGL_RS15920 0.48 -3.3 3,022,196 + SGL_RS15920 0.59 -4.3 3,022,251 - SGL_RS15920 0.69 -1.9 3,022,274 + SGL_RS15920 0.74 -2.4 3,022,281 - SGL_RS15920 0.75 -3.9 3,022,352 + SGL_RS15920 0.89 -2.4 3,022,454 + -1.6 3,022,526 - +0.2 3,022,568 + -4.3 3,022,576 - -5.6 3,022,646 + -2.7 3,022,662 + -4.6 3,022,672 + -3.4 3,022,677 - -4.4 3,022,679 + -4.3 3,022,687 - -3.1 3,022,687 - -5.2 3,022,687 - -4.1 3,022,687 - -4.5 3,022,687 - -5.3 3,022,715 + SGL_RS15925 0.11 -4.3 3,022,723 - SGL_RS15925 0.11 -2.4 3,022,847 - SGL_RS15925 0.18 -6.0 3,022,962 - SGL_RS15925 0.25 -4.0 3,023,049 - SGL_RS15925 0.30 -4.9 3,023,064 - SGL_RS15925 0.31 -2.2 3,023,345 + SGL_RS15925 0.47 -4.7 3,023,517 + SGL_RS15925 0.57 -5.2 3,023,518 - SGL_RS15925 0.57 -3.9 3,023,561 + SGL_RS15925 0.59 -3.6 3,023,676 + SGL_RS15925 0.66 -3.8 3,023,729 + SGL_RS15925 0.69 -6.0 3,023,847 - SGL_RS15925 0.76 -5.4 3,023,879 - SGL_RS15925 0.77 -5.0 3,023,907 + SGL_RS15925 0.79 -5.4 3,024,066 + SGL_RS15925 0.88 -4.6 3,024,144 + -1.2 3,024,144 + -5.5 3,024,228 - -4.3 3,024,241 + -4.1
Or see this region's nucleotide sequence