Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11495 and SGL_RS11500 are separated by 60 nucleotides SGL_RS11500 and SGL_RS11505 are separated by 116 nucleotides SGL_RS11505 and SGL_RS11510 are separated by 14 nucleotides
SGL_RS11495: SGL_RS11495 - Ig-like domain-containing protein, at 2,035,474 to 2,036,850
_RS11495
SGL_RS11500: SGL_RS11500 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 2,036,911 to 2,038,527
_RS11500
SGL_RS11505: SGL_RS11505 - NUDIX domain-containing protein, at 2,038,644 to 2,039,063
_RS11505
SGL_RS11510: SGL_RS11510 - dihydroneopterin aldolase, at 2,039,078 to 2,039,530
_RS11510
Position (kb)
2036
2037
2038
2039 Strain fitness (log2 ratio)
-9
-8
-7
-6
-5
-4
-3
-2
-1
0
1 at 2036.052 kb on + strand, within SGL_RS11495 at 2036.619 kb on + strand, within SGL_RS11495 at 2036.671 kb on - strand, within SGL_RS11495 at 2036.767 kb on - strand at 2036.804 kb on + strand at 2036.804 kb on + strand at 2037.138 kb on + strand, within SGL_RS11500 at 2037.266 kb on + strand, within SGL_RS11500 at 2037.283 kb on - strand, within SGL_RS11500 at 2037.297 kb on - strand, within SGL_RS11500 at 2037.483 kb on - strand, within SGL_RS11500 at 2037.596 kb on + strand, within SGL_RS11500 at 2037.829 kb on + strand, within SGL_RS11500 at 2037.867 kb on + strand, within SGL_RS11500 at 2038.132 kb on - strand, within SGL_RS11500 at 2038.204 kb on + strand, within SGL_RS11500 at 2038.204 kb on + strand, within SGL_RS11500 at 2038.212 kb on - strand, within SGL_RS11500 at 2038.251 kb on + strand, within SGL_RS11500 at 2038.327 kb on + strand, within SGL_RS11500 at 2038.887 kb on + strand, within SGL_RS11505 at 2038.969 kb on - strand, within SGL_RS11505 at 2039.227 kb on - strand, within SGL_RS11510 at 2039.277 kb on + strand, within SGL_RS11510 at 2039.292 kb on + strand, within SGL_RS11510 at 2039.300 kb on - strand, within SGL_RS11510 at 2039.377 kb on + strand, within SGL_RS11510
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 2,036,052 + SGL_RS11495 0.42 -4.8 2,036,619 + SGL_RS11495 0.83 -0.0 2,036,671 - SGL_RS11495 0.87 -0.2 2,036,767 - -0.4 2,036,804 + -0.5 2,036,804 + -0.4 2,037,138 + SGL_RS11500 0.14 -7.1 2,037,266 + SGL_RS11500 0.22 -6.2 2,037,283 - SGL_RS11500 0.23 -6.8 2,037,297 - SGL_RS11500 0.24 -7.3 2,037,483 - SGL_RS11500 0.35 -4.1 2,037,596 + SGL_RS11500 0.42 -8.9 2,037,829 + SGL_RS11500 0.57 -6.3 2,037,867 + SGL_RS11500 0.59 -6.6 2,038,132 - SGL_RS11500 0.76 -6.2 2,038,204 + SGL_RS11500 0.80 -6.1 2,038,204 + SGL_RS11500 0.80 -6.9 2,038,212 - SGL_RS11500 0.80 -3.9 2,038,251 + SGL_RS11500 0.83 -7.6 2,038,327 + SGL_RS11500 0.88 -7.6 2,038,887 + SGL_RS11505 0.58 -4.7 2,038,969 - SGL_RS11505 0.77 -3.5 2,039,227 - SGL_RS11510 0.33 -5.3 2,039,277 + SGL_RS11510 0.44 -3.8 2,039,292 + SGL_RS11510 0.47 -4.1 2,039,300 - SGL_RS11510 0.49 -4.0 2,039,377 + SGL_RS11510 0.66 -3.9
Or see this region's nucleotide sequence