Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11295 and SGL_RS11300 are separated by 202 nucleotides SGL_RS11300 and SGL_RS11305 are separated by 8 nucleotides SGL_RS11305 and SGL_RS11310 are separated by 129 nucleotides
SGL_RS11295: SGL_RS11295 - hypothetical protein, at 1,997,497 to 1,997,790
_RS11295
SGL_RS11300: SGL_RS11300 - NfeD family protein, at 1,997,993 to 1,998,451
_RS11300
SGL_RS11305: SGL_RS11305 - carboxylating nicotinate-nucleotide diphosphorylase, at 1,998,460 to 1,999,347
_RS11305
SGL_RS11310: SGL_RS11310 - hypothetical protein, at 1,999,477 to 2,000,730
_RS11310
Position (kb)
1998
1999
2000 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1997.906 kb on + strand at 1997.907 kb on - strand at 1998.029 kb on + strand at 1998.032 kb on - strand at 1998.039 kb on - strand, within SGL_RS11300 at 1998.306 kb on - strand, within SGL_RS11300 at 1998.490 kb on + strand at 1998.498 kb on - strand at 1998.508 kb on - strand at 1998.859 kb on + strand, within SGL_RS11305 at 1998.902 kb on + strand, within SGL_RS11305 at 1998.967 kb on + strand, within SGL_RS11305 at 1998.975 kb on - strand, within SGL_RS11305 at 1998.975 kb on - strand, within SGL_RS11305 at 1998.975 kb on - strand, within SGL_RS11305 at 1999.100 kb on + strand, within SGL_RS11305 at 1999.110 kb on - strand, within SGL_RS11305 at 1999.234 kb on + strand, within SGL_RS11305 at 1999.536 kb on + strand at 1999.549 kb on - strand at 1999.650 kb on - strand, within SGL_RS11310 at 1999.720 kb on - strand, within SGL_RS11310 at 1999.744 kb on - strand, within SGL_RS11310 at 1999.855 kb on + strand, within SGL_RS11310 at 2000.102 kb on + strand, within SGL_RS11310 at 2000.102 kb on + strand, within SGL_RS11310 at 2000.102 kb on + strand, within SGL_RS11310 at 2000.210 kb on + strand, within SGL_RS11310 at 2000.218 kb on - strand, within SGL_RS11310 at 2000.321 kb on + strand, within SGL_RS11310 at 2000.321 kb on + strand, within SGL_RS11310
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 1,997,906 + -0.4 1,997,907 - -0.3 1,998,029 + +0.1 1,998,032 - -0.6 1,998,039 - SGL_RS11300 0.10 +0.3 1,998,306 - SGL_RS11300 0.68 -0.1 1,998,490 + +0.9 1,998,498 - -0.2 1,998,508 - -4.1 1,998,859 + SGL_RS11305 0.45 -5.0 1,998,902 + SGL_RS11305 0.50 -3.3 1,998,967 + SGL_RS11305 0.57 -5.3 1,998,975 - SGL_RS11305 0.58 -4.7 1,998,975 - SGL_RS11305 0.58 -2.6 1,998,975 - SGL_RS11305 0.58 -5.5 1,999,100 + SGL_RS11305 0.72 -4.3 1,999,110 - SGL_RS11305 0.73 -3.3 1,999,234 + SGL_RS11305 0.87 -4.7 1,999,536 + +0.2 1,999,549 - -0.2 1,999,650 - SGL_RS11310 0.14 +0.2 1,999,720 - SGL_RS11310 0.19 +0.2 1,999,744 - SGL_RS11310 0.21 -0.1 1,999,855 + SGL_RS11310 0.30 -0.0 2,000,102 + SGL_RS11310 0.50 -0.2 2,000,102 + SGL_RS11310 0.50 +0.1 2,000,102 + SGL_RS11310 0.50 -0.5 2,000,210 + SGL_RS11310 0.58 -0.3 2,000,218 - SGL_RS11310 0.59 -0.3 2,000,321 + SGL_RS11310 0.67 -0.7 2,000,321 + SGL_RS11310 0.67 -0.0
Or see this region's nucleotide sequence