Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08745 and SGL_RS08750 are separated by 53 nucleotides SGL_RS08750 and SGL_RS08755 are separated by 45 nucleotides SGL_RS08755 and SGL_RS08760 are separated by 40 nucleotides SGL_RS08760 and SGL_RS08765 are separated by 42 nucleotides
SGL_RS08745: SGL_RS08745 - ATP-dependent sacrificial sulfur transferase LarE, at 1,468,153 to 1,468,959
_RS08745
SGL_RS08750: SGL_RS08750 - YdcF family protein, at 1,469,013 to 1,469,801
_RS08750
SGL_RS08755: SGL_RS08755 - 3-hydroxyacyl-ACP dehydratase FabZ, at 1,469,847 to 1,470,347
_RS08755
SGL_RS08760: SGL_RS08760 - hypothetical protein, at 1,470,388 to 1,470,567
_RS08760
SGL_RS08765: SGL_RS08765 - 2-phosphosulfolactate phosphatase family protein, at 1,470,610 to 1,471,335
_RS08765
Position (kb) 1469
1470 Strain fitness (log2 ratio) -8
-7
-6
-5
-4
-3
-2
-1
0
1 at 1468.231 kb on + strand at 1468.308 kb on - strand, within SGL_RS08745 at 1468.375 kb on - strand, within SGL_RS08745 at 1468.559 kb on - strand, within SGL_RS08745 at 1468.644 kb on + strand, within SGL_RS08745 at 1468.644 kb on + strand, within SGL_RS08745 at 1468.912 kb on - strand at 1469.030 kb on + strand at 1469.113 kb on - strand, within SGL_RS08750 at 1469.191 kb on - strand, within SGL_RS08750 at 1469.231 kb on + strand, within SGL_RS08750 at 1469.316 kb on - strand, within SGL_RS08750 at 1469.367 kb on + strand, within SGL_RS08750 at 1469.374 kb on + strand, within SGL_RS08750 at 1469.427 kb on - strand, within SGL_RS08750 at 1469.475 kb on + strand, within SGL_RS08750 at 1469.537 kb on + strand, within SGL_RS08750 at 1469.537 kb on + strand, within SGL_RS08750 at 1469.545 kb on - strand, within SGL_RS08750 at 1469.615 kb on - strand, within SGL_RS08750 at 1469.638 kb on - strand, within SGL_RS08750 at 1470.483 kb on + strand, within SGL_RS08760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 1,468,231 + -2.9 1,468,308 - SGL_RS08745 0.19 -3.8 1,468,375 - SGL_RS08745 0.28 -1.7 1,468,559 - SGL_RS08745 0.50 -3.5 1,468,644 + SGL_RS08745 0.61 -3.5 1,468,644 + SGL_RS08745 0.61 -3.1 1,468,912 - -1.7 1,469,030 + -7.3 1,469,113 - SGL_RS08750 0.13 -7.4 1,469,191 - SGL_RS08750 0.23 -4.4 1,469,231 + SGL_RS08750 0.28 -7.8 1,469,316 - SGL_RS08750 0.38 -6.9 1,469,367 + SGL_RS08750 0.45 -5.7 1,469,374 + SGL_RS08750 0.46 -7.7 1,469,427 - SGL_RS08750 0.52 -7.4 1,469,475 + SGL_RS08750 0.59 -6.0 1,469,537 + SGL_RS08750 0.66 -5.2 1,469,537 + SGL_RS08750 0.66 -6.3 1,469,545 - SGL_RS08750 0.67 -6.5 1,469,615 - SGL_RS08750 0.76 -6.8 1,469,638 - SGL_RS08750 0.79 -6.0 1,470,483 + SGL_RS08760 0.53 -0.4
Or see this region's nucleotide sequence