Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08070 and SGL_RS08075 are separated by 71 nucleotides SGL_RS08075 and SGL_RS08080 are separated by 310 nucleotides SGL_RS08080 and SGL_RS08085 are separated by 15 nucleotides
SGL_RS08070: SGL_RS08070 - tocopherol cyclase family protein, at 1,323,672 to 1,324,763
_RS08070
SGL_RS08075: SGL_RS08075 - peroxiredoxin, at 1,324,835 to 1,325,404
_RS08075
SGL_RS08080: SGL_RS08080 - Fur family transcriptional regulator, at 1,325,715 to 1,326,134
_RS08080
SGL_RS08085: SGL_RS08085 - DUF1499 domain-containing protein, at 1,326,150 to 1,326,626
_RS08085
Position (kb)
1324
1325
1326 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1324.021 kb on - strand, within SGL_RS08070 at 1324.036 kb on + strand, within SGL_RS08070 at 1324.099 kb on - strand, within SGL_RS08070 at 1324.131 kb on - strand, within SGL_RS08070 at 1324.203 kb on + strand, within SGL_RS08070 at 1324.260 kb on - strand, within SGL_RS08070 at 1324.312 kb on + strand, within SGL_RS08070 at 1324.345 kb on + strand, within SGL_RS08070 at 1324.353 kb on - strand, within SGL_RS08070 at 1324.394 kb on - strand, within SGL_RS08070 at 1324.458 kb on + strand, within SGL_RS08070 at 1324.594 kb on + strand, within SGL_RS08070 at 1324.661 kb on + strand at 1324.671 kb on - strand at 1324.703 kb on - strand at 1324.762 kb on + strand at 1324.766 kb on + strand at 1324.776 kb on + strand at 1324.789 kb on - strand at 1324.812 kb on - strand at 1324.841 kb on - strand at 1324.903 kb on - strand, within SGL_RS08075 at 1324.903 kb on - strand, within SGL_RS08075 at 1324.943 kb on + strand, within SGL_RS08075 at 1325.025 kb on - strand, within SGL_RS08075 at 1325.238 kb on + strand, within SGL_RS08075 at 1325.265 kb on + strand, within SGL_RS08075 at 1325.619 kb on + strand at 1325.624 kb on + strand at 1325.632 kb on - strand at 1325.632 kb on - strand at 1325.718 kb on + strand at 1325.718 kb on + strand at 1325.790 kb on - strand, within SGL_RS08080 at 1325.886 kb on + strand, within SGL_RS08080 at 1325.886 kb on + strand, within SGL_RS08080 at 1325.894 kb on - strand, within SGL_RS08080 at 1325.897 kb on + strand, within SGL_RS08080 at 1326.359 kb on + strand, within SGL_RS08085
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 1,324,021 - SGL_RS08070 0.32 +0.3 1,324,036 + SGL_RS08070 0.33 +1.2 1,324,099 - SGL_RS08070 0.39 +0.4 1,324,131 - SGL_RS08070 0.42 -0.2 1,324,203 + SGL_RS08070 0.49 +0.0 1,324,260 - SGL_RS08070 0.54 -0.1 1,324,312 + SGL_RS08070 0.59 +0.1 1,324,345 + SGL_RS08070 0.62 +0.2 1,324,353 - SGL_RS08070 0.62 +1.2 1,324,394 - SGL_RS08070 0.66 -0.5 1,324,458 + SGL_RS08070 0.72 +0.0 1,324,594 + SGL_RS08070 0.84 +0.4 1,324,661 + +0.3 1,324,671 - +0.4 1,324,703 - +0.3 1,324,762 + +0.7 1,324,766 + +0.2 1,324,776 + +0.0 1,324,789 - -0.1 1,324,812 - -0.1 1,324,841 - +0.5 1,324,903 - SGL_RS08075 0.12 -5.6 1,324,903 - SGL_RS08075 0.12 -3.1 1,324,943 + SGL_RS08075 0.19 -5.4 1,325,025 - SGL_RS08075 0.33 -2.4 1,325,238 + SGL_RS08075 0.71 -4.4 1,325,265 + SGL_RS08075 0.75 -4.9 1,325,619 + -0.2 1,325,624 + -0.3 1,325,632 - -0.7 1,325,632 - +1.0 1,325,718 + -2.7 1,325,718 + -3.4 1,325,790 - SGL_RS08080 0.18 -4.0 1,325,886 + SGL_RS08080 0.41 -1.7 1,325,886 + SGL_RS08080 0.41 -5.3 1,325,894 - SGL_RS08080 0.43 -3.3 1,325,897 + SGL_RS08080 0.43 -4.2 1,326,359 + SGL_RS08085 0.44 -0.1
Or see this region's nucleotide sequence