Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06005 and SGL_RS06010 are separated by 184 nucleotides SGL_RS06010 and SGL_RS06015 are separated by 97 nucleotides
SGL_RS06005: SGL_RS06005 - DNA mismatch repair endonuclease MutL, at 880,078 to 881,838
_RS06005
SGL_RS06010: SGL_RS06010 - branched-chain amino acid ABC transporter permease, at 882,023 to 883,189
_RS06010
SGL_RS06015: SGL_RS06015 - urea ABC transporter permease subunit UrtC, at 883,287 to 884,519
_RS06015
Position (kb) 882
883
884 Strain fitness (log2 ratio) -2
-1
0
1 at 881.028 kb on - strand, within SGL_RS06005 at 881.048 kb on + strand, within SGL_RS06005 at 881.138 kb on + strand, within SGL_RS06005 at 881.217 kb on + strand, within SGL_RS06005 at 881.286 kb on + strand, within SGL_RS06005 at 881.300 kb on - strand, within SGL_RS06005 at 881.310 kb on - strand, within SGL_RS06005 at 881.331 kb on - strand, within SGL_RS06005 at 881.379 kb on - strand, within SGL_RS06005 at 881.446 kb on + strand, within SGL_RS06005 at 881.453 kb on - strand, within SGL_RS06005 at 881.537 kb on - strand, within SGL_RS06005 at 881.537 kb on - strand, within SGL_RS06005 at 881.539 kb on + strand, within SGL_RS06005 at 881.641 kb on - strand, within SGL_RS06005 at 881.736 kb on - strand at 881.819 kb on - strand at 881.843 kb on + strand at 881.851 kb on - strand at 882.196 kb on - strand, within SGL_RS06010 at 882.196 kb on - strand, within SGL_RS06010 at 882.664 kb on - strand, within SGL_RS06010 at 882.699 kb on - strand, within SGL_RS06010 at 882.777 kb on - strand, within SGL_RS06010 at 882.777 kb on - strand, within SGL_RS06010 at 882.805 kb on + strand, within SGL_RS06010 at 882.839 kb on - strand, within SGL_RS06010 at 883.103 kb on + strand at 883.236 kb on + strand at 883.364 kb on + strand at 883.545 kb on + strand, within SGL_RS06015 at 883.550 kb on + strand, within SGL_RS06015 at 883.555 kb on + strand, within SGL_RS06015 at 883.555 kb on + strand, within SGL_RS06015 at 883.718 kb on + strand, within SGL_RS06015 at 883.752 kb on + strand, within SGL_RS06015 at 884.005 kb on - strand, within SGL_RS06015 at 884.053 kb on + strand, within SGL_RS06015 at 884.091 kb on - strand, within SGL_RS06015 at 884.129 kb on + strand, within SGL_RS06015 at 884.137 kb on - strand, within SGL_RS06015 at 884.138 kb on + strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.146 kb on - strand, within SGL_RS06015 at 884.156 kb on - strand, within SGL_RS06015 at 884.167 kb on - strand, within SGL_RS06015 at 884.169 kb on - strand, within SGL_RS06015
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 881,028 - SGL_RS06005 0.54 -0.0 881,048 + SGL_RS06005 0.55 +0.1 881,138 + SGL_RS06005 0.60 +0.3 881,217 + SGL_RS06005 0.65 -0.4 881,286 + SGL_RS06005 0.69 +0.1 881,300 - SGL_RS06005 0.69 -0.0 881,310 - SGL_RS06005 0.70 +0.1 881,331 - SGL_RS06005 0.71 -0.4 881,379 - SGL_RS06005 0.74 -0.1 881,446 + SGL_RS06005 0.78 -0.6 881,453 - SGL_RS06005 0.78 -0.1 881,537 - SGL_RS06005 0.83 -0.1 881,537 - SGL_RS06005 0.83 +0.0 881,539 + SGL_RS06005 0.83 -0.1 881,641 - SGL_RS06005 0.89 +0.0 881,736 - -0.4 881,819 - +0.1 881,843 + +0.0 881,851 - -0.2 882,196 - SGL_RS06010 0.15 -2.2 882,196 - SGL_RS06010 0.15 -2.4 882,664 - SGL_RS06010 0.55 -2.2 882,699 - SGL_RS06010 0.58 -1.6 882,777 - SGL_RS06010 0.65 -1.7 882,777 - SGL_RS06010 0.65 -1.7 882,805 + SGL_RS06010 0.67 -1.4 882,839 - SGL_RS06010 0.70 -1.5 883,103 + -1.3 883,236 + -1.2 883,364 + -0.4 883,545 + SGL_RS06015 0.21 -2.2 883,550 + SGL_RS06015 0.21 -2.0 883,555 + SGL_RS06015 0.22 -1.7 883,555 + SGL_RS06015 0.22 -1.5 883,718 + SGL_RS06015 0.35 -1.9 883,752 + SGL_RS06015 0.38 -1.6 884,005 - SGL_RS06015 0.58 -1.6 884,053 + SGL_RS06015 0.62 -0.7 884,091 - SGL_RS06015 0.65 -1.1 884,129 + SGL_RS06015 0.68 -1.5 884,137 - SGL_RS06015 0.69 -1.3 884,138 + SGL_RS06015 0.69 -2.0 884,146 - SGL_RS06015 0.70 -1.0 884,146 - SGL_RS06015 0.70 -1.6 884,146 - SGL_RS06015 0.70 -2.0 884,146 - SGL_RS06015 0.70 -1.7 884,146 - SGL_RS06015 0.70 -1.9 884,146 - SGL_RS06015 0.70 -1.0 884,146 - SGL_RS06015 0.70 -1.5 884,146 - SGL_RS06015 0.70 -1.7 884,146 - SGL_RS06015 0.70 -1.1 884,146 - SGL_RS06015 0.70 -1.6 884,156 - SGL_RS06015 0.70 -1.3 884,167 - SGL_RS06015 0.71 -2.6 884,169 - SGL_RS06015 0.72 -1.8
Or see this region's nucleotide sequence