Experiment: D-Sorbitol 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02145 and SGL_RS02150 are separated by 72 nucleotides SGL_RS02150 and SGL_RS02155 are separated by 38 nucleotides SGL_RS02155 and SGL_RS02160 are separated by 224 nucleotides SGL_RS02160 and SGL_RS02165 are separated by 30 nucleotides
SGL_RS02145: SGL_RS02145 - metallophosphoesterase, at 65,827 to 67,533
_RS02145
SGL_RS02150: SGL_RS02150 - WecB/TagA/CpsF family glycosyltransferase, at 67,606 to 68,361
_RS02150
SGL_RS02155: SGL_RS02155 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 68,400 to 69,059
_RS02155
SGL_RS02160: SGL_RS02160 - GDSL-type esterase/lipase family protein, at 69,284 to 69,985
_RS02160
SGL_RS02165: SGL_RS02165 - hypothetical protein, at 70,016 to 70,393
_RS02165
Position (kb) 68
69
70 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 67.406 kb on + strand at 67.463 kb on - strand at 67.657 kb on + strand at 67.660 kb on - strand at 67.786 kb on + strand, within SGL_RS02150 at 67.794 kb on - strand, within SGL_RS02150 at 67.823 kb on + strand, within SGL_RS02150 at 67.838 kb on + strand, within SGL_RS02150 at 67.850 kb on + strand, within SGL_RS02150 at 68.167 kb on + strand, within SGL_RS02150 at 68.528 kb on + strand, within SGL_RS02155 at 68.600 kb on + strand, within SGL_RS02155 at 68.720 kb on - strand, within SGL_RS02155 at 68.790 kb on - strand, within SGL_RS02155 at 68.879 kb on - strand, within SGL_RS02155 at 68.975 kb on - strand, within SGL_RS02155 at 68.988 kb on - strand, within SGL_RS02155 at 69.173 kb on + strand at 69.355 kb on - strand, within SGL_RS02160 at 69.371 kb on + strand, within SGL_RS02160 at 69.452 kb on + strand, within SGL_RS02160 at 69.485 kb on + strand, within SGL_RS02160 at 69.485 kb on + strand, within SGL_RS02160 at 69.493 kb on - strand, within SGL_RS02160 at 69.601 kb on + strand, within SGL_RS02160 at 69.609 kb on - strand, within SGL_RS02160 at 69.656 kb on + strand, within SGL_RS02160 at 69.666 kb on - strand, within SGL_RS02160 at 69.712 kb on - strand, within SGL_RS02160 at 69.735 kb on - strand, within SGL_RS02160 at 69.755 kb on - strand, within SGL_RS02160 at 69.761 kb on + strand, within SGL_RS02160 at 69.930 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol 500 mM remove 67,406 + -4.2 67,463 - -3.6 67,657 + +0.7 67,660 - +0.1 67,786 + SGL_RS02150 0.24 +1.0 67,794 - SGL_RS02150 0.25 +0.7 67,823 + SGL_RS02150 0.29 +0.4 67,838 + SGL_RS02150 0.31 +0.8 67,850 + SGL_RS02150 0.32 +0.6 68,167 + SGL_RS02150 0.74 +0.7 68,528 + SGL_RS02155 0.19 -5.5 68,600 + SGL_RS02155 0.30 -0.1 68,720 - SGL_RS02155 0.48 -4.0 68,790 - SGL_RS02155 0.59 -4.1 68,879 - SGL_RS02155 0.73 -4.1 68,975 - SGL_RS02155 0.87 -2.1 68,988 - SGL_RS02155 0.89 -6.0 69,173 + -0.0 69,355 - SGL_RS02160 0.10 +0.1 69,371 + SGL_RS02160 0.12 -0.3 69,452 + SGL_RS02160 0.24 +0.0 69,485 + SGL_RS02160 0.29 +0.0 69,485 + SGL_RS02160 0.29 -0.2 69,493 - SGL_RS02160 0.30 +0.2 69,601 + SGL_RS02160 0.45 -0.0 69,609 - SGL_RS02160 0.46 -0.3 69,656 + SGL_RS02160 0.53 -0.1 69,666 - SGL_RS02160 0.54 -0.1 69,712 - SGL_RS02160 0.61 +0.5 69,735 - SGL_RS02160 0.64 +0.1 69,755 - SGL_RS02160 0.67 +0.1 69,761 + SGL_RS02160 0.68 +0.6 69,930 - -0.1
Or see this region's nucleotide sequence