Experiment: Chloride 800 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14010 and SGL_RS14015 are separated by 238 nucleotides SGL_RS14015 and SGL_RS14020 overlap by 4 nucleotides SGL_RS14020 and SGL_RS14025 are separated by 21 nucleotides
SGL_RS14010: SGL_RS14010 - 30S ribosomal protein S4, at 2,603,947 to 2,604,555
_RS14010
SGL_RS14015: SGL_RS14015 - AI-2E family transporter, at 2,604,794 to 2,605,873
_RS14015
SGL_RS14020: SGL_RS14020 - hypothetical protein, at 2,605,870 to 2,606,073
_RS14020
SGL_RS14025: SGL_RS14025 - gamma-glutamyl-phosphate reductase, at 2,606,095 to 2,607,357
_RS14025
Position (kb)
2604
2605
2606 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2603.847 kb on + strand at 2603.851 kb on - strand at 2604.636 kb on - strand at 2604.790 kb on - strand at 2604.916 kb on + strand, within SGL_RS14015 at 2604.917 kb on + strand, within SGL_RS14015 at 2605.192 kb on + strand, within SGL_RS14015 at 2605.193 kb on + strand, within SGL_RS14015 at 2605.374 kb on + strand, within SGL_RS14015 at 2605.374 kb on + strand, within SGL_RS14015 at 2605.382 kb on - strand, within SGL_RS14015 at 2605.429 kb on + strand, within SGL_RS14015 at 2605.430 kb on + strand, within SGL_RS14015 at 2605.438 kb on - strand, within SGL_RS14015 at 2605.443 kb on - strand, within SGL_RS14015 at 2605.444 kb on - strand, within SGL_RS14015 at 2605.444 kb on - strand, within SGL_RS14015 at 2605.491 kb on + strand, within SGL_RS14015 at 2605.499 kb on - strand, within SGL_RS14015 at 2605.576 kb on + strand, within SGL_RS14015 at 2605.610 kb on + strand, within SGL_RS14015 at 2605.618 kb on - strand, within SGL_RS14015 at 2605.689 kb on - strand, within SGL_RS14015 at 2605.701 kb on - strand, within SGL_RS14015 at 2605.775 kb on - strand at 2605.952 kb on + strand, within SGL_RS14020 at 2605.965 kb on - strand, within SGL_RS14020 at 2606.097 kb on + strand at 2606.271 kb on - strand, within SGL_RS14025 at 2606.330 kb on + strand, within SGL_RS14025 at 2606.425 kb on + strand, within SGL_RS14025 at 2606.484 kb on - strand, within SGL_RS14025 at 2606.598 kb on - strand, within SGL_RS14025 at 2606.598 kb on - strand, within SGL_RS14025 at 2606.654 kb on + strand, within SGL_RS14025 at 2606.693 kb on + strand, within SGL_RS14025 at 2606.784 kb on - strand, within SGL_RS14025 at 2606.850 kb on - strand, within SGL_RS14025
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 800 mM remove 2,603,847 + +0.1 2,603,851 - +0.3 2,604,636 - +0.1 2,604,790 - -0.0 2,604,916 + SGL_RS14015 0.11 -2.0 2,604,917 + SGL_RS14015 0.11 -2.8 2,605,192 + SGL_RS14015 0.37 -4.1 2,605,193 + SGL_RS14015 0.37 -3.1 2,605,374 + SGL_RS14015 0.54 -1.9 2,605,374 + SGL_RS14015 0.54 -3.8 2,605,382 - SGL_RS14015 0.54 -2.3 2,605,429 + SGL_RS14015 0.59 -3.8 2,605,430 + SGL_RS14015 0.59 -1.4 2,605,438 - SGL_RS14015 0.60 -2.4 2,605,443 - SGL_RS14015 0.60 -2.5 2,605,444 - SGL_RS14015 0.60 -3.6 2,605,444 - SGL_RS14015 0.60 -2.8 2,605,491 + SGL_RS14015 0.65 -3.1 2,605,499 - SGL_RS14015 0.65 -2.7 2,605,576 + SGL_RS14015 0.72 -4.0 2,605,610 + SGL_RS14015 0.76 -2.3 2,605,618 - SGL_RS14015 0.76 -2.7 2,605,689 - SGL_RS14015 0.83 -2.5 2,605,701 - SGL_RS14015 0.84 -2.9 2,605,775 - -3.1 2,605,952 + SGL_RS14020 0.40 -0.5 2,605,965 - SGL_RS14020 0.47 -4.1 2,606,097 + -1.0 2,606,271 - SGL_RS14025 0.14 +0.0 2,606,330 + SGL_RS14025 0.19 -1.2 2,606,425 + SGL_RS14025 0.26 -0.6 2,606,484 - SGL_RS14025 0.31 -0.7 2,606,598 - SGL_RS14025 0.40 -1.1 2,606,598 - SGL_RS14025 0.40 -0.6 2,606,654 + SGL_RS14025 0.44 -1.2 2,606,693 + SGL_RS14025 0.47 -0.3 2,606,784 - SGL_RS14025 0.55 -1.0 2,606,850 - SGL_RS14025 0.60 -0.3
Or see this region's nucleotide sequence