Experiment: Chloride 800 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09800 and SGL_RS09805 are separated by 107 nucleotides SGL_RS09805 and SGL_RS09810 are separated by 107 nucleotides SGL_RS09810 and SGL_RS09815 are separated by 159 nucleotides SGL_RS09815 and SGL_RS09820 are separated by 53 nucleotides SGL_RS09820 and SGL_RS09825 are separated by 134 nucleotides
SGL_RS09800: SGL_RS09800 - FAD-binding oxidoreductase, at 1,685,899 to 1,687,218
_RS09800
SGL_RS09805: SGL_RS09805 - photosystem I reaction center subunit IX, at 1,687,326 to 1,687,448
_RS09805
SGL_RS09810: SGL_RS09810 - photosystem I reaction center subunit III, at 1,687,556 to 1,688,053
_RS09810
SGL_RS09815: SGL_RS09815 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,688,213 to 1,689,259
_RS09815
SGL_RS09820: SGL_RS09820 - ribosome maturation factor RimM, at 1,689,313 to 1,689,870
_RS09820
SGL_RS09825: SGL_RS09825 - SDR family oxidoreductase, at 1,690,005 to 1,690,934
_RS09825
Position (kb) 1688
1689
1690 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 1687.504 kb on - strand at 1687.831 kb on + strand, within SGL_RS09810 at 1688.024 kb on + strand at 1688.025 kb on - strand at 1688.370 kb on - strand, within SGL_RS09815 at 1688.393 kb on - strand, within SGL_RS09815 at 1688.419 kb on - strand, within SGL_RS09815 at 1688.419 kb on - strand, within SGL_RS09815 at 1688.468 kb on - strand, within SGL_RS09815 at 1688.552 kb on + strand, within SGL_RS09815 at 1688.715 kb on + strand, within SGL_RS09815 at 1688.745 kb on - strand, within SGL_RS09815 at 1688.824 kb on + strand, within SGL_RS09815 at 1688.898 kb on + strand, within SGL_RS09815 at 1688.918 kb on - strand, within SGL_RS09815 at 1688.996 kb on + strand, within SGL_RS09815 at 1689.206 kb on + strand at 1689.321 kb on + strand at 1689.321 kb on + strand at 1689.387 kb on - strand, within SGL_RS09820 at 1689.539 kb on - strand, within SGL_RS09820 at 1689.598 kb on + strand, within SGL_RS09820 at 1689.967 kb on + strand at 1690.256 kb on + strand, within SGL_RS09825
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 800 mM remove 1,687,504 - -0.4 1,687,831 + SGL_RS09810 0.55 -0.0 1,688,024 + -1.5 1,688,025 - -0.9 1,688,370 - SGL_RS09815 0.15 -3.2 1,688,393 - SGL_RS09815 0.17 -1.8 1,688,419 - SGL_RS09815 0.20 -2.4 1,688,419 - SGL_RS09815 0.20 -1.5 1,688,468 - SGL_RS09815 0.24 -2.8 1,688,552 + SGL_RS09815 0.32 -4.4 1,688,715 + SGL_RS09815 0.48 -3.4 1,688,745 - SGL_RS09815 0.51 -1.9 1,688,824 + SGL_RS09815 0.58 -2.7 1,688,898 + SGL_RS09815 0.65 -3.8 1,688,918 - SGL_RS09815 0.67 -3.1 1,688,996 + SGL_RS09815 0.75 -4.9 1,689,206 + -3.8 1,689,321 + +0.3 1,689,321 + -0.1 1,689,387 - SGL_RS09820 0.13 -0.1 1,689,539 - SGL_RS09820 0.41 +0.0 1,689,598 + SGL_RS09820 0.51 +0.6 1,689,967 + +0.5 1,690,256 + SGL_RS09825 0.27 -2.6
Or see this region's nucleotide sequence