Experiment: Chloride 800 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06095 and SGL_RS19560 are separated by 20 nucleotides SGL_RS19560 and SGL_RS06105 are separated by 350 nucleotides SGL_RS06105 and SGL_RS06110 are separated by 68 nucleotides
SGL_RS06095: SGL_RS06095 - type II 3-dehydroquinate dehydratase, at 903,148 to 903,606
_RS06095
SGL_RS19560: SGL_RS19560 - hypothetical protein, at 903,627 to 903,764
_RS19560
SGL_RS06105: SGL_RS06105 - magnesium transporter, at 904,115 to 905,506
_RS06105
SGL_RS06110: SGL_RS06110 - glycosyltransferase family 4 protein, at 905,575 to 906,762
_RS06110
Position (kb) 904
905
906 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 903.353 kb on - strand, within SGL_RS06095 at 903.408 kb on - strand, within SGL_RS06095 at 903.516 kb on + strand, within SGL_RS06095 at 903.687 kb on - strand, within SGL_RS19560 at 904.044 kb on - strand at 904.073 kb on - strand at 904.080 kb on + strand at 904.119 kb on - strand at 904.134 kb on - strand at 904.134 kb on - strand at 904.141 kb on + strand at 904.260 kb on + strand, within SGL_RS06105 at 904.306 kb on - strand, within SGL_RS06105 at 904.364 kb on + strand, within SGL_RS06105 at 904.366 kb on + strand, within SGL_RS06105 at 904.449 kb on - strand, within SGL_RS06105 at 904.458 kb on - strand, within SGL_RS06105 at 904.510 kb on + strand, within SGL_RS06105 at 904.577 kb on - strand, within SGL_RS06105 at 904.582 kb on - strand, within SGL_RS06105 at 904.613 kb on + strand, within SGL_RS06105 at 904.621 kb on - strand, within SGL_RS06105 at 904.621 kb on - strand, within SGL_RS06105 at 904.695 kb on + strand, within SGL_RS06105 at 904.701 kb on + strand, within SGL_RS06105 at 904.783 kb on + strand, within SGL_RS06105 at 904.823 kb on - strand, within SGL_RS06105 at 904.912 kb on - strand, within SGL_RS06105 at 904.928 kb on + strand, within SGL_RS06105 at 904.947 kb on - strand, within SGL_RS06105 at 904.962 kb on - strand, within SGL_RS06105 at 905.037 kb on + strand, within SGL_RS06105 at 905.045 kb on - strand, within SGL_RS06105 at 905.107 kb on + strand, within SGL_RS06105 at 905.115 kb on - strand, within SGL_RS06105 at 905.152 kb on + strand, within SGL_RS06105 at 905.152 kb on + strand, within SGL_RS06105 at 905.160 kb on - strand, within SGL_RS06105 at 905.160 kb on - strand, within SGL_RS06105 at 905.209 kb on - strand, within SGL_RS06105 at 905.261 kb on - strand, within SGL_RS06105 at 905.261 kb on - strand, within SGL_RS06105 at 905.271 kb on - strand, within SGL_RS06105 at 905.279 kb on + strand, within SGL_RS06105 at 905.307 kb on + strand, within SGL_RS06105 at 905.336 kb on - strand, within SGL_RS06105 at 905.346 kb on - strand, within SGL_RS06105 at 905.874 kb on - strand, within SGL_RS06110 at 905.902 kb on + strand, within SGL_RS06110 at 906.346 kb on + strand, within SGL_RS06110 at 906.379 kb on + strand, within SGL_RS06110 at 906.379 kb on + strand, within SGL_RS06110 at 906.463 kb on + strand, within SGL_RS06110 at 906.482 kb on - strand, within SGL_RS06110
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 800 mM remove 903,353 - SGL_RS06095 0.45 -2.6 903,408 - SGL_RS06095 0.57 -1.9 903,516 + SGL_RS06095 0.80 -2.3 903,687 - SGL_RS19560 0.43 -2.6 904,044 - -0.2 904,073 - +0.3 904,080 + -0.5 904,119 - -0.3 904,134 - -3.7 904,134 - -4.0 904,141 + -2.2 904,260 + SGL_RS06105 0.10 -4.3 904,306 - SGL_RS06105 0.14 -5.0 904,364 + SGL_RS06105 0.18 -4.8 904,366 + SGL_RS06105 0.18 -4.3 904,449 - SGL_RS06105 0.24 -3.4 904,458 - SGL_RS06105 0.25 -4.4 904,510 + SGL_RS06105 0.28 -4.4 904,577 - SGL_RS06105 0.33 -5.1 904,582 - SGL_RS06105 0.34 -5.1 904,613 + SGL_RS06105 0.36 -4.4 904,621 - SGL_RS06105 0.36 -2.8 904,621 - SGL_RS06105 0.36 -4.4 904,695 + SGL_RS06105 0.42 -4.1 904,701 + SGL_RS06105 0.42 -4.7 904,783 + SGL_RS06105 0.48 -4.8 904,823 - SGL_RS06105 0.51 -2.7 904,912 - SGL_RS06105 0.57 -3.6 904,928 + SGL_RS06105 0.58 -3.1 904,947 - SGL_RS06105 0.60 -4.3 904,962 - SGL_RS06105 0.61 -4.0 905,037 + SGL_RS06105 0.66 -5.3 905,045 - SGL_RS06105 0.67 -3.9 905,107 + SGL_RS06105 0.71 -4.5 905,115 - SGL_RS06105 0.72 -3.9 905,152 + SGL_RS06105 0.74 -3.8 905,152 + SGL_RS06105 0.74 -3.3 905,160 - SGL_RS06105 0.75 -4.1 905,160 - SGL_RS06105 0.75 -3.4 905,209 - SGL_RS06105 0.79 -3.1 905,261 - SGL_RS06105 0.82 -3.4 905,261 - SGL_RS06105 0.82 -4.3 905,271 - SGL_RS06105 0.83 -4.2 905,279 + SGL_RS06105 0.84 -3.2 905,307 + SGL_RS06105 0.86 -5.5 905,336 - SGL_RS06105 0.88 -4.6 905,346 - SGL_RS06105 0.88 -5.2 905,874 - SGL_RS06110 0.25 -0.2 905,902 + SGL_RS06110 0.28 -0.9 906,346 + SGL_RS06110 0.65 +1.2 906,379 + SGL_RS06110 0.68 -0.1 906,379 + SGL_RS06110 0.68 -0.9 906,463 + SGL_RS06110 0.75 -1.0 906,482 - SGL_RS06110 0.76 -0.0
Or see this region's nucleotide sequence