Experiment: Chloride 800 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS01585 and SGL_RS01590 are separated by 30 nucleotides SGL_RS01590 and SGL_RS01595 overlap by 8 nucleotides SGL_RS01595 and SGL_RS01600 are separated by 11 nucleotides
SGL_RS01585: SGL_RS01585 - phospholipase D-like domain-containing protein, at 43,696 to 47,151
_RS01585
SGL_RS01590: SGL_RS01590 - hypothetical protein, at 47,182 to 47,409
_RS01590
SGL_RS01595: SGL_RS01595 - type II toxin-antitoxin system VapC family toxin, at 47,402 to 47,815
_RS01595
SGL_RS01600: SGL_RS01600 - Eco57I restriction-modification methylase domain-containing protein, at 47,827 to 51,129
_RS01600
Position (kb) 47
48 Strain fitness (log2 ratio) -1
0
1 at 46.195 kb on + strand, within SGL_RS01585 at 46.255 kb on - strand, within SGL_RS01585 at 46.304 kb on - strand, within SGL_RS01585 at 46.309 kb on - strand, within SGL_RS01585 at 46.563 kb on - strand, within SGL_RS01585 at 46.579 kb on + strand, within SGL_RS01585 at 46.644 kb on - strand, within SGL_RS01585 at 46.676 kb on + strand, within SGL_RS01585 at 46.684 kb on - strand, within SGL_RS01585 at 46.736 kb on + strand, within SGL_RS01585 at 46.749 kb on - strand, within SGL_RS01585 at 46.749 kb on - strand, within SGL_RS01585 at 46.749 kb on - strand, within SGL_RS01585 at 46.867 kb on - strand at 46.996 kb on + strand at 46.998 kb on + strand at 47.079 kb on + strand at 47.120 kb on - strand at 47.330 kb on - strand, within SGL_RS01590 at 47.533 kb on - strand, within SGL_RS01595 at 47.685 kb on + strand, within SGL_RS01595 at 47.688 kb on - strand, within SGL_RS01595 at 47.753 kb on - strand, within SGL_RS01595 at 47.849 kb on + strand at 47.915 kb on - strand at 47.982 kb on - strand at 47.995 kb on - strand at 48.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 800 mM remove 46,195 + SGL_RS01585 0.72 +0.5 46,255 - SGL_RS01585 0.74 +0.1 46,304 - SGL_RS01585 0.75 +0.2 46,309 - SGL_RS01585 0.76 -0.1 46,563 - SGL_RS01585 0.83 +0.1 46,579 + SGL_RS01585 0.83 -0.2 46,644 - SGL_RS01585 0.85 +0.2 46,676 + SGL_RS01585 0.86 +0.3 46,684 - SGL_RS01585 0.86 +0.3 46,736 + SGL_RS01585 0.88 +0.1 46,749 - SGL_RS01585 0.88 -0.2 46,749 - SGL_RS01585 0.88 +0.2 46,749 - SGL_RS01585 0.88 +0.2 46,867 - +0.1 46,996 + -0.1 46,998 + +0.4 47,079 + +0.2 47,120 - +0.0 47,330 - SGL_RS01590 0.65 -1.4 47,533 - SGL_RS01595 0.32 +0.4 47,685 + SGL_RS01595 0.68 +0.2 47,688 - SGL_RS01595 0.69 +0.0 47,753 - SGL_RS01595 0.85 -0.0 47,849 + +0.4 47,915 - -0.1 47,982 - +0.0 47,995 - -0.0 48,125 - -0.1
Or see this region's nucleotide sequence