Experiment: Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10315 and SGL_RS10320 are separated by 192 nucleotides SGL_RS10320 and SGL_RS10325 are separated by 326 nucleotides
SGL_RS10315: SGL_RS10315 - hypothetical protein, at 1,785,835 to 1,788,357
_RS10315
SGL_RS10320: SGL_RS10320 - ribosome biogenesis GTPase Der, at 1,788,550 to 1,789,908
_RS10320
SGL_RS10325: SGL_RS10325 - hypothetical protein, at 1,790,235 to 1,791,353
_RS10325
Position (kb)
1788
1789
1790 Strain fitness (log2 ratio)
-2
-1
0
1 at 1787.647 kb on + strand, within SGL_RS10315 at 1787.675 kb on - strand, within SGL_RS10315 at 1787.776 kb on - strand, within SGL_RS10315 at 1787.847 kb on + strand, within SGL_RS10315 at 1787.871 kb on - strand, within SGL_RS10315 at 1788.071 kb on - strand, within SGL_RS10315 at 1788.071 kb on - strand, within SGL_RS10315 at 1788.144 kb on - strand at 1788.202 kb on + strand at 1788.202 kb on + strand at 1788.289 kb on + strand at 1788.296 kb on + strand at 1789.021 kb on + strand, within SGL_RS10320 at 1789.100 kb on + strand, within SGL_RS10320 at 1789.178 kb on + strand, within SGL_RS10320 at 1789.186 kb on - strand, within SGL_RS10320 at 1789.369 kb on - strand, within SGL_RS10320 at 1789.550 kb on + strand, within SGL_RS10320 at 1789.972 kb on + strand at 1790.038 kb on - strand at 1790.232 kb on + strand at 1790.253 kb on - strand at 1790.293 kb on + strand at 1790.538 kb on + strand, within SGL_RS10325 at 1790.639 kb on - strand, within SGL_RS10325 at 1790.745 kb on + strand, within SGL_RS10325 at 1790.846 kb on + strand, within SGL_RS10325 at 1790.874 kb on + strand, within SGL_RS10325 at 1790.889 kb on - strand, within SGL_RS10325
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 500 mM remove 1,787,647 + SGL_RS10315 0.72 -0.0 1,787,675 - SGL_RS10315 0.73 +0.8 1,787,776 - SGL_RS10315 0.77 +0.3 1,787,847 + SGL_RS10315 0.80 +1.6 1,787,871 - SGL_RS10315 0.81 -0.2 1,788,071 - SGL_RS10315 0.89 +0.6 1,788,071 - SGL_RS10315 0.89 +0.0 1,788,144 - -0.0 1,788,202 + -0.6 1,788,202 + +0.0 1,788,289 + +0.3 1,788,296 + -0.3 1,789,021 + SGL_RS10320 0.35 -2.1 1,789,100 + SGL_RS10320 0.40 -2.2 1,789,178 + SGL_RS10320 0.46 -1.5 1,789,186 - SGL_RS10320 0.47 -2.2 1,789,369 - SGL_RS10320 0.60 -1.2 1,789,550 + SGL_RS10320 0.74 -2.5 1,789,972 + +0.1 1,790,038 - -0.2 1,790,232 + -0.0 1,790,253 - +0.3 1,790,293 + +0.1 1,790,538 + SGL_RS10325 0.27 +0.2 1,790,639 - SGL_RS10325 0.36 +0.1 1,790,745 + SGL_RS10325 0.46 +0.2 1,790,846 + SGL_RS10325 0.55 -0.1 1,790,874 + SGL_RS10325 0.57 +0.3 1,790,889 - SGL_RS10325 0.58 +0.1
Or see this region's nucleotide sequence