Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11890 and SGL_RS20150 are separated by 38 nucleotides SGL_RS20150 and SGL_RS11895 are separated by 137 nucleotides SGL_RS11895 and SGL_RS11900 are separated by 125 nucleotides
SGL_RS11890: SGL_RS11890 - NAD-binding protein, at 2,121,641 to 2,123,347
_RS11890
SGL_RS20150: SGL_RS20150 - hypothetical protein, at 2,123,386 to 2,123,508
_RS20150
SGL_RS11895: SGL_RS11895 - phage holin family protein, at 2,123,646 to 2,123,996
_RS11895
SGL_RS11900: SGL_RS11900 - radical SAM protein, at 2,124,122 to 2,124,973
_RS11900
Position (kb)
2123
2124 Strain fitness (log2 ratio)
-1
0
1 at 2122.453 kb on - strand, within SGL_RS11890 at 2122.639 kb on + strand, within SGL_RS11890 at 2122.645 kb on - strand, within SGL_RS11890 at 2122.706 kb on - strand, within SGL_RS11890 at 2122.721 kb on - strand, within SGL_RS11890 at 2122.757 kb on - strand, within SGL_RS11890 at 2122.764 kb on + strand, within SGL_RS11890 at 2122.770 kb on - strand, within SGL_RS11890 at 2122.796 kb on - strand, within SGL_RS11890 at 2123.005 kb on + strand, within SGL_RS11890 at 2123.035 kb on - strand, within SGL_RS11890 at 2123.038 kb on - strand, within SGL_RS11890 at 2123.045 kb on - strand, within SGL_RS11890 at 2123.047 kb on + strand, within SGL_RS11890 at 2123.100 kb on + strand, within SGL_RS11890 at 2123.180 kb on + strand at 2123.399 kb on + strand, within SGL_RS20150 at 2123.400 kb on + strand, within SGL_RS20150 at 2123.401 kb on - strand, within SGL_RS20150 at 2123.407 kb on - strand, within SGL_RS20150 at 2123.407 kb on - strand, within SGL_RS20150 at 2123.408 kb on - strand, within SGL_RS20150 at 2123.432 kb on - strand, within SGL_RS20150 at 2123.438 kb on + strand, within SGL_RS20150 at 2123.516 kb on - strand at 2123.548 kb on - strand at 2123.620 kb on + strand at 2123.840 kb on + strand, within SGL_RS11895 at 2123.840 kb on + strand, within SGL_RS11895 at 2123.959 kb on + strand, within SGL_RS11895 at 2124.463 kb on - strand, within SGL_RS11900
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,122,453 - SGL_RS11890 0.48 +0.4 2,122,639 + SGL_RS11890 0.58 +0.4 2,122,645 - SGL_RS11890 0.59 -0.1 2,122,706 - SGL_RS11890 0.62 +0.4 2,122,721 - SGL_RS11890 0.63 +0.1 2,122,757 - SGL_RS11890 0.65 -0.0 2,122,764 + SGL_RS11890 0.66 -0.0 2,122,770 - SGL_RS11890 0.66 +0.0 2,122,796 - SGL_RS11890 0.68 -0.1 2,123,005 + SGL_RS11890 0.80 +0.3 2,123,035 - SGL_RS11890 0.82 +0.1 2,123,038 - SGL_RS11890 0.82 +0.3 2,123,045 - SGL_RS11890 0.82 +0.1 2,123,047 + SGL_RS11890 0.82 -0.3 2,123,100 + SGL_RS11890 0.85 +0.2 2,123,180 + +0.1 2,123,399 + SGL_RS20150 0.11 +0.1 2,123,400 + SGL_RS20150 0.11 -0.0 2,123,401 - SGL_RS20150 0.12 +0.4 2,123,407 - SGL_RS20150 0.17 +0.6 2,123,407 - SGL_RS20150 0.17 +0.4 2,123,408 - SGL_RS20150 0.18 +0.4 2,123,432 - SGL_RS20150 0.37 -0.1 2,123,438 + SGL_RS20150 0.42 +0.2 2,123,516 - +0.2 2,123,548 - +0.1 2,123,620 + -0.2 2,123,840 + SGL_RS11895 0.55 +0.3 2,123,840 + SGL_RS11895 0.55 +0.1 2,123,959 + SGL_RS11895 0.89 +0.6 2,124,463 - SGL_RS11900 0.40 -0.2
Or see this region's nucleotide sequence